Gene Shewmr4_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0968 
Symbol 
ID4251619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1134320 
End bp1135408 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content48% 
IMG OID638117531 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_733105 
Protein GI113969312 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTC ATTCCAAACT CAAAGCAGAA AACGAAGCGC TTAAACAGCG GCTGATGGAT 
CAACAACACA GACACGAATT GGAAATTGAA GAGTTAAAAA ACATGGCCCG AGAAAACGAG
GCCATGCAGC AACAGTCCCG TCAGCATATT GATCTGTATA GCGAAGTCAT CGCCTGCCAA
AACCAAGGCG GCGAGATGCT AAATGCAGTG AGAGAAGGCC TAGCCAGCAG CGCCGAATTA
CTCACAGAAG AACAGGCTGC GCTGTCTGAA TTAGATAAAA TATTTGATCA AACACGGGTA
GCAATTGCCA ATTTAGGCAG CCGCGCGACT GACATCAACG AGCAAGCCAC CAACAGTATG
GATGCCGTAA CCGAGCTGAA TAACACTACC TCATCGATTA ATCAGTTTGT CTCCGCCATT
CAAGGCATCT CAGAGCAAAC CAACCTACTC GCCCTCAATG CCGCCATCGA AGCGGCTCGT
GCGGGAGAAG CGGGCCGAGG CTTTGCCGTG GTCGCCGACG AAGTCAGGCA ATTAGCGAGC
AAGGCCCACG AGGCCAGTAG CCAAATTGAA AAACTGGTAA AGCAGATTGT GGCACAGGCG
TCGAATATCA AAGAAATTGT GCATAACAAT CAAAACAGTG CCCTCGATGT CGCCTCTTCT
TCGACTCAAA TCGGCCAAGT GGTTGAAGAT GTACTTCAAC GTTCTCACAA AATGCAGCAG
GTGATCCACA ATGCGGCGAC CGCATCTTTT TTAAATACCA CTAAACTCGA CCACGCGGTA
TGGAAGAGCC ATGTGTATCA ATTAATTGAG AAGAATCAAC ATAACCACAG TGTGAACTCC
CATACAGAGT GCCGCTTGGG TCAATGGTAT TTCAAAGGAT TTGGCGCGGA AAATTATCAG
CATTTAAGCA ACTTTAAAGC CCTCGACGCT CCCCATAAGG CTGTGCACGA TGCGGGTAAA
GCGGCGCTGG CTGCAAAACA GAAAGGCAAC TTAGCAGACA TGGTAAAGCA GTTACATGCT
ATGGAAGACT CGAGTATGCG GGTTGTGGCT TGCCTCGATA ATCTACTGCG AGATGTGTAT
CGCCAGTAA
 
Protein sequence
MWFHSKLKAE NEALKQRLMD QQHRHELEIE ELKNMARENE AMQQQSRQHI DLYSEVIACQ 
NQGGEMLNAV REGLASSAEL LTEEQAALSE LDKIFDQTRV AIANLGSRAT DINEQATNSM
DAVTELNNTT SSINQFVSAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS
KAHEASSQIE KLVKQIVAQA SNIKEIVHNN QNSALDVASS STQIGQVVED VLQRSHKMQQ
VIHNAATASF LNTTKLDHAV WKSHVYQLIE KNQHNHSVNS HTECRLGQWY FKGFGAENYQ
HLSNFKALDA PHKAVHDAGK AALAAKQKGN LADMVKQLHA MEDSSMRVVA CLDNLLRDVY
RQ