Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0968 |
Symbol | |
ID | 4251619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1134320 |
End bp | 1135408 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117531 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_733105 |
Protein GI | 113969312 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTTC ATTCCAAACT CAAAGCAGAA AACGAAGCGC TTAAACAGCG GCTGATGGAT CAACAACACA GACACGAATT GGAAATTGAA GAGTTAAAAA ACATGGCCCG AGAAAACGAG GCCATGCAGC AACAGTCCCG TCAGCATATT GATCTGTATA GCGAAGTCAT CGCCTGCCAA AACCAAGGCG GCGAGATGCT AAATGCAGTG AGAGAAGGCC TAGCCAGCAG CGCCGAATTA CTCACAGAAG AACAGGCTGC GCTGTCTGAA TTAGATAAAA TATTTGATCA AACACGGGTA GCAATTGCCA ATTTAGGCAG CCGCGCGACT GACATCAACG AGCAAGCCAC CAACAGTATG GATGCCGTAA CCGAGCTGAA TAACACTACC TCATCGATTA ATCAGTTTGT CTCCGCCATT CAAGGCATCT CAGAGCAAAC CAACCTACTC GCCCTCAATG CCGCCATCGA AGCGGCTCGT GCGGGAGAAG CGGGCCGAGG CTTTGCCGTG GTCGCCGACG AAGTCAGGCA ATTAGCGAGC AAGGCCCACG AGGCCAGTAG CCAAATTGAA AAACTGGTAA AGCAGATTGT GGCACAGGCG TCGAATATCA AAGAAATTGT GCATAACAAT CAAAACAGTG CCCTCGATGT CGCCTCTTCT TCGACTCAAA TCGGCCAAGT GGTTGAAGAT GTACTTCAAC GTTCTCACAA AATGCAGCAG GTGATCCACA ATGCGGCGAC CGCATCTTTT TTAAATACCA CTAAACTCGA CCACGCGGTA TGGAAGAGCC ATGTGTATCA ATTAATTGAG AAGAATCAAC ATAACCACAG TGTGAACTCC CATACAGAGT GCCGCTTGGG TCAATGGTAT TTCAAAGGAT TTGGCGCGGA AAATTATCAG CATTTAAGCA ACTTTAAAGC CCTCGACGCT CCCCATAAGG CTGTGCACGA TGCGGGTAAA GCGGCGCTGG CTGCAAAACA GAAAGGCAAC TTAGCAGACA TGGTAAAGCA GTTACATGCT ATGGAAGACT CGAGTATGCG GGTTGTGGCT TGCCTCGATA ATCTACTGCG AGATGTGTAT CGCCAGTAA
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Protein sequence | MWFHSKLKAE NEALKQRLMD QQHRHELEIE ELKNMARENE AMQQQSRQHI DLYSEVIACQ NQGGEMLNAV REGLASSAEL LTEEQAALSE LDKIFDQTRV AIANLGSRAT DINEQATNSM DAVTELNNTT SSINQFVSAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS KAHEASSQIE KLVKQIVAQA SNIKEIVHNN QNSALDVASS STQIGQVVED VLQRSHKMQQ VIHNAATASF LNTTKLDHAV WKSHVYQLIE KNQHNHSVNS HTECRLGQWY FKGFGAENYQ HLSNFKALDA PHKAVHDAGK AALAAKQKGN LADMVKQLHA MEDSSMRVVA CLDNLLRDVY RQ
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