| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0965 |
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| Symbol | |
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| ID | 4251616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1128808 |
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| End bp | 1129968 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117528 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_733102 |
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| Protein GI | 113969309 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0738044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTCG CGTTGACAAA GTCTGCCTTA CTCGTACTCG AAGATGGAAC CGTATTCACT
GGCACAGCGA TAGGTGCCGA TGGTCTCTCT GTTGGTGAAG TTGTTTTTAA CACTTCGATG
ACTGGATACC AAGAAATTTT AACTGATCCC TCTTATTCAC GCCAGATTGT AACTTTAACC
TACCCCCACA TTGGTAATAC TGGTACCAAT AATGAAGACG TCGAATCCAA TGGGGTTCAT
GCTTGTGGTT TAATCATTCG CGATCTTCCG CTTATAGCAA GTAGTTTCCG TAATCAACAA
ACTCTCAGCG ATTATCTCAA AGCAAACAAT GTTGTTGGCA TAGCAGATAT CGATACTCGT
AAATTAACTC GAATCCTCCG TGAAAAAGGT GCCCAAGCGG GTTGCATCAT GGCGGGTGCT
GACTTAGATG AAGCCAAAGC ACTTGCTGCT GCTAAAGCCT TCCCGGGTTT AAAGGGCATG
GATTTAGCGA AAGAAGTGAC TACCGAGACG GCCTATCAAT GGCGTAAAGG TAGTTGGCGT
TTGGTGGGCG GTTTGCCTGA AGACACGCCA GCTGAAGCGC TGAAGTACAA AGTGGTTGCC
TATGACTACG GCGTTAAGCA AAACATCCTG CGCATGTTGG TTGACCGTGG CTGTGATGTC
ACAGTGGTTC CTGCAAAAAC ATCGGCTGCT GAAGTGTTAG CGATGAACCC AGACGGTGTG
TTCCTCTCTA ACGGCCCTGG TGACCCAGAG CCATGTGATT ACGCCATCGA AGCGATTCAA
CAAATCCTGA AAACCGATAC GCCGATTTTT GGTATCTGTT TAGGCCACCA ATTACTGGCA
TTGGCATCAG GCGCGAAAAC CTTAAAGATG AAGTTTGGTC ACCACGGTGC TAACCACCCA
GTGAGCAATA TCGAAAAAGG TAACGTGATG ATCACCAGCC AAAACCACGG TTTTGCTGCC
GATGAAGCCA CATTACCTGC CAATATCAAA GTGACCCACA AGTCACTGTT CGATGGTTCA
CTGCAAGGTA TCCATCTGAC GGACAAACCT GCGTTCAGCT TCCAAGGTCA CCCTGAAGCG
AGCCCTGGTC CGAACGATGC GGCCCCACTG TTCGATCACT TTATCGAGCT TATTGAACAA
TACCGTCAGA ACGCTAAGTA A
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| Protein sequence | MEVALTKSAL LVLEDGTVFT GTAIGADGLS VGEVVFNTSM TGYQEILTDP SYSRQIVTLT
YPHIGNTGTN NEDVESNGVH ACGLIIRDLP LIASSFRNQQ TLSDYLKANN VVGIADIDTR
KLTRILREKG AQAGCIMAGA DLDEAKALAA AKAFPGLKGM DLAKEVTTET AYQWRKGSWR
LVGGLPEDTP AEALKYKVVA YDYGVKQNIL RMLVDRGCDV TVVPAKTSAA EVLAMNPDGV
FLSNGPGDPE PCDYAIEAIQ QILKTDTPIF GICLGHQLLA LASGAKTLKM KFGHHGANHP
VSNIEKGNVM ITSQNHGFAA DEATLPANIK VTHKSLFDGS LQGIHLTDKP AFSFQGHPEA
SPGPNDAAPL FDHFIELIEQ YRQNAK
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