Gene Shewmr4_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0963 
Symbol 
ID4251614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1127138 
End bp1127755 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID638117526 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_733100 
Protein GI113969307 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.63781e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA AATTCAGTAC TGTTGAACAG CAAGCAAGCT ATGGTGTAGG TCGTCAAATG 
GGCGAGCAAC TGGCTGCTAA TTCTTTTGAA GGTGTGGATA TTGCTGCCGT TCAAGCAGGT
TTAGCCGATG CATTTGCTGG CGTTGAAAGC GCTGTATCTA TGCAAGATAT GCAAGTTGCA
TTCACTGAGA TCAGCCGTCG TATTCAAGCG GCTCAAGAGC AAGCTGCTGC TGCCGCTTCT
GCTGAAGGCG AAGCCTTTTT AGCTGAAAAC GCTAAGCGTG CCGGCGTGAC CGTGACTGAC
TCTGGTCTGC AATACGAAGT ATTAGTTCAA GGTAGCGGTG CAAAACCAAC CTACGAAGAC
ACTGTGCGTA CTCACTACCA TGGTTCTTTC ATCAATGGTG ATGTGTTCGA TAGCTCTGTT
GTTCGTGGTC AACCAGCTGA ATTCCCAGTA TCTGGCGTTA TCGCTGGCTG GACTGAAGCG
CTGCAACTGA TGCCAGTTGG TACTAAGTTA AAATTATTCG TTCCACATCA CTTAGCTTAC
GGTGAGCGTG GTGCGGGTGC TTCTATTCCT CCATACTCAA CCTTAGTGTT TGAAGTCGAG
TTATTAGACA TCGTCTAA
 
Protein sequence
MSDKFSTVEQ QASYGVGRQM GEQLAANSFE GVDIAAVQAG LADAFAGVES AVSMQDMQVA 
FTEISRRIQA AQEQAAAAAS AEGEAFLAEN AKRAGVTVTD SGLQYEVLVQ GSGAKPTYED
TVRTHYHGSF INGDVFDSSV VRGQPAEFPV SGVIAGWTEA LQLMPVGTKL KLFVPHHLAY
GERGAGASIP PYSTLVFEVE LLDIV