Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0958 |
Symbol | |
ID | 4251609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1121242 |
End bp | 1122375 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638117521 |
Product | chaperone protein DnaJ |
Protein accession | YP_733095 |
Protein GI | 113969302 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGC GAGATTATTA CGAAGTATTA GGCGTTGGTC GTGACGCCAG CGAACGTGAA ATTAAAAAAG CCTACAAGCG TTTGGCGATG AAGTTTCACC CCGATCGCAA TCCTGGCGAC AAAGCTGCCG AGGCGAGCTT CAAAGAAGTG AAAGAAGCCT ACGAAATCCT GACCGATGCC AACAAAAAAG CGGCCTATGA CCAATTTGGT CATGCGGGTG TGGATCCGAA TCGCGGCGGC GGTGGTGGCT ACGGTGGTGC GGGAGATTTC GGCGATATTT TCGGTGATGT CTTTGGCGAT ATTTTCGGCG GTGGACGTCG TGGCGGTCAA CGCCAAGCGG CCCGCGGCTC AGATTTACGT TACAACCTAG AGTTATCACT GGAAGAAGCC GTAAAAGGCC TCACCAAAGA ACTGCGTATT CCGACCTTAG CCAGCTGTGA TGTATGTGAC GGCAGCGGTG CGAAAAAAGG CACCTCGGCG ACCACTTGTG GTACCTGTCA TGGTCAAGGC CAAGTGCAAA TGCGCCAAGG TTTCTTCACC GTGCAACAAG CCTGCCCAAC CTGTCATGGC CGCGGCAAGA TCATTAAAGA TCCTTGCACT AAGTGCCATG GCGATGGCCG TGTCGAGAAG ACCAAAACAT TGTCAGTTAA GATCCCTGCG GGTGTCGACA CTGGCGACCG TATCCGCTTA GCGGGTGAAG GTGAAGCGGG CGAATTTGGT GCGCCACCGG GCGATTTATA CGTTCAGGTC ACAGTACGTG AACATGCTAT TTTCGTGCGT GATGGCAACA ACCTCTACTG CGAAGTGCCG ATTTCATTCA GCAAAGCGGC GCTCGGCGGC GAGATTGAAG TCCCAACACT GGACGGCAAA GTCAGCCTGA AGATCCCAGC TGAAACGCAA ACGGGCCGCA TGTTCCGTCT GCGTGGCAAA GGGGTGAAAT CGGTTCGCAG CCATGCCGTT GGCGACCTGC TCTGCAAAGT CGTGATGGAA ACGCCAGTCA ACCTCAATGA GCGTCAGAAA GAATTACTGC GTGAGTTTGA GGCGACCTTA ACCGGTGAAT CAAAGAAGCA CAGCCCAAAG GCTGAAGGCT TTTTCGATGG AGTGAAGAAG TTTTTCCAAG ACCTAAATAG CTAA
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Protein sequence | MSKRDYYEVL GVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEV KEAYEILTDA NKKAAYDQFG HAGVDPNRGG GGGYGGAGDF GDIFGDVFGD IFGGGRRGGQ RQAARGSDLR YNLELSLEEA VKGLTKELRI PTLASCDVCD GSGAKKGTSA TTCGTCHGQG QVQMRQGFFT VQQACPTCHG RGKIIKDPCT KCHGDGRVEK TKTLSVKIPA GVDTGDRIRL AGEGEAGEFG APPGDLYVQV TVREHAIFVR DGNNLYCEVP ISFSKAALGG EIEVPTLDGK VSLKIPAETQ TGRMFRLRGK GVKSVRSHAV GDLLCKVVME TPVNLNERQK ELLREFEATL TGESKKHSPK AEGFFDGVKK FFQDLNS
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