Gene Shewmr4_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0958 
Symbol 
ID4251609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1121242 
End bp1122375 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content53% 
IMG OID638117521 
Productchaperone protein DnaJ 
Protein accessionYP_733095 
Protein GI113969302 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC GAGATTATTA CGAAGTATTA GGCGTTGGTC GTGACGCCAG CGAACGTGAA 
ATTAAAAAAG CCTACAAGCG TTTGGCGATG AAGTTTCACC CCGATCGCAA TCCTGGCGAC
AAAGCTGCCG AGGCGAGCTT CAAAGAAGTG AAAGAAGCCT ACGAAATCCT GACCGATGCC
AACAAAAAAG CGGCCTATGA CCAATTTGGT CATGCGGGTG TGGATCCGAA TCGCGGCGGC
GGTGGTGGCT ACGGTGGTGC GGGAGATTTC GGCGATATTT TCGGTGATGT CTTTGGCGAT
ATTTTCGGCG GTGGACGTCG TGGCGGTCAA CGCCAAGCGG CCCGCGGCTC AGATTTACGT
TACAACCTAG AGTTATCACT GGAAGAAGCC GTAAAAGGCC TCACCAAAGA ACTGCGTATT
CCGACCTTAG CCAGCTGTGA TGTATGTGAC GGCAGCGGTG CGAAAAAAGG CACCTCGGCG
ACCACTTGTG GTACCTGTCA TGGTCAAGGC CAAGTGCAAA TGCGCCAAGG TTTCTTCACC
GTGCAACAAG CCTGCCCAAC CTGTCATGGC CGCGGCAAGA TCATTAAAGA TCCTTGCACT
AAGTGCCATG GCGATGGCCG TGTCGAGAAG ACCAAAACAT TGTCAGTTAA GATCCCTGCG
GGTGTCGACA CTGGCGACCG TATCCGCTTA GCGGGTGAAG GTGAAGCGGG CGAATTTGGT
GCGCCACCGG GCGATTTATA CGTTCAGGTC ACAGTACGTG AACATGCTAT TTTCGTGCGT
GATGGCAACA ACCTCTACTG CGAAGTGCCG ATTTCATTCA GCAAAGCGGC GCTCGGCGGC
GAGATTGAAG TCCCAACACT GGACGGCAAA GTCAGCCTGA AGATCCCAGC TGAAACGCAA
ACGGGCCGCA TGTTCCGTCT GCGTGGCAAA GGGGTGAAAT CGGTTCGCAG CCATGCCGTT
GGCGACCTGC TCTGCAAAGT CGTGATGGAA ACGCCAGTCA ACCTCAATGA GCGTCAGAAA
GAATTACTGC GTGAGTTTGA GGCGACCTTA ACCGGTGAAT CAAAGAAGCA CAGCCCAAAG
GCTGAAGGCT TTTTCGATGG AGTGAAGAAG TTTTTCCAAG ACCTAAATAG CTAA
 
Protein sequence
MSKRDYYEVL GVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEV KEAYEILTDA 
NKKAAYDQFG HAGVDPNRGG GGGYGGAGDF GDIFGDVFGD IFGGGRRGGQ RQAARGSDLR
YNLELSLEEA VKGLTKELRI PTLASCDVCD GSGAKKGTSA TTCGTCHGQG QVQMRQGFFT
VQQACPTCHG RGKIIKDPCT KCHGDGRVEK TKTLSVKIPA GVDTGDRIRL AGEGEAGEFG
APPGDLYVQV TVREHAIFVR DGNNLYCEVP ISFSKAALGG EIEVPTLDGK VSLKIPAETQ
TGRMFRLRGK GVKSVRSHAV GDLLCKVVME TPVNLNERQK ELLREFEATL TGESKKHSPK
AEGFFDGVKK FFQDLNS