| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0950 |
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| Symbol | |
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| ID | 4251601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1110440 |
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| End bp | 1112611 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117513 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_733087 |
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| Protein GI | 113969294 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000152119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGC GTTTTAATCT ACTTCCACTT GCTGCTGCAG TAACCCTAGC TTTGAATCCT
TTGGCGCTGA TGGCCGAAGA ACAAACCGCT TCAACAACAG AGACACAAGA TCAAAATATC
GAAAAAATCA CTGTGATGGG TAAATACACA GTGAGTCGTA ATATTGATAC CGCAACGGGG
TTAGGACTCA CGCTGCGGGA AACGCCACAG TCGGTCAGCA TTATGACAGC GGATCGGATT
GAAGATCAGG CGCTAAATAC CGTGGTCGAT GTGGTCAACA ACACTGTGGG TTTATCATCC
TCAAAAACCG ATAACGTGCG TAACGGTTTT TCGGCCCGCG GTTTTACCGT GCAAAACTAT
CAAATTGATG GCGTGCCTTT ATCTTGGAGT TTAGGTGGTG ATGCAGGTGA AACGGTATCG
GATGTGTCTA TCTACGAGCG CGTTGAAGTC GTGCGTGGTG CTACCGGATT ATTAACGGGT
GCTGGCGATC CTTCGGCCTC GATTAACTTA GTGCGTAAGC ATGCCGACAG TTCTGATCTT
AAAGGTTATG TGGATGTCGC CACTGGAAGT TGGGATAAAA AACAAGTCAC CGCGGATGTG
TCTAATGGTC TGAATGAAGA CGGCAGCGTG CGTGGGCGCT TGGTCGCTAA GTATGTGAAT
AGCGATTCTT ACCAAGATCT GTATCAAGAC CGCAAAACCA TTCTCTATGG TGTGGTCGAC
AGTGATATTA CGGCCAACAC CTTGCTGCGC GTCGGTGGTA GCTATAACCA CAACGATCCC
AAAGGGGCGA TGTGGGGCGC GTTGCCTGCC GTCTTTAGTG ATGGTTCTGC CACTGATTGG
GATACATCGG CCACCACAGC TGCCGATTGG AGCCGCTGGG AAACCAAAAA CATCAACTAC
TTTGCGAACC TGAATCACTA CTTCAGCAAT GGTTGGCAGC TGGTCGCTAA CTACAACCGC
ATGGAGTATG AGACCACCAC TAAGATGATC TACATGTCGG GTATGCTCGA TAAAGACACG
GGGGTGGGAC TCAGTGGACA GCGTTATCAC AGCCATGGTG AAAGTAACTC GAATAACTTT
GATGTGCAGC TAAAGGGCGA CTATGACCTC TTTGGTCAAA CCCATGAGTT TGTGACGGGC
GCTTTGTATA GTAAGCAAAA ATCCTACGCC GATACCTATG AGCCTATCCG TGACGATATG
ACGGGGTGGG ACTCACAAGT GGTGGATAAC TTCTACGAAT GGCAACAAAA TCAGTTTGCC
GAGCCAGAAT GGTCGAGCAA CGCGAACCGT CAGCTCAATA TGGATACCGA GCAAAAAGGC
TTTTATGCGG CGACTCGCTT AACGATTACC GATGATTTTA AACTGATTGC CGGTGGACGT
ATCTCAAGCT GGAACCGTGA AGGCGTGAGC TATGGTACCG ATACTAACTT TGGTGATGAT
GGGGTGTTTG TGCCCTATGT TGGCGCCTTG TACGATATCA ATGACGCGCA CCGTATTTAC
GCCAGTTATA CCGGGATTTT TAACCCGCAG AATAATTTCG ATGCCGATCA AAATTACCTC
GACCCATTAG AAGGCAAAGC CTACGAATTA GGTCTGAAGA GTGCTTATCT TGACGATCGT
CTACATACCA CTGTGGCCGT GTTCCAAATT GACCAAGATA ACTTGGCAAC CTTAGCCGGA
ACGATTGTTA TCGGTGGTCA ACCCGTGAAT TATTATGAGG CCGCACAAGG CACTAAGAGT
AAGGGATTTG AGCTAGAGGT GGTGGGTGAG CCTGCCGATG GCTGGAATAT CTCTGCGGGT
TACTCGCAAT TTAATGCCGA AGATGCAGAG GGTAAGCGGG TTGCGACTAC CAGTCCGCAG
AAGCAATTCA AACTGTTTAC CACCTACCAA TTTGTGGACT TATTGCCTGA GTTAACCATA
GGTGGTGGGG TGAATTGGCA AAGCGACAGT TACTCTGAAG GCGGTGGTGT GGCAATCAAG
CAGGATGCTT ACTCCCTAGT GAATCTGATG GCACGCTACG ATCTGGCTGA GAATATGGAT
CTGCAGGTTA ACGTAGAGAA TCTGCTGGAT GAGAAATATT ATGCCTATAT GACAGCGTCT
GGCATTGCTT ACAGTGCGTA TCACTACGGC GCGCCACGTA ATTTTACCGT CAGCTTTAAC
TATCGTTTTT AA
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| Protein sequence | MTMRFNLLPL AAAVTLALNP LALMAEEQTA STTETQDQNI EKITVMGKYT VSRNIDTATG
LGLTLRETPQ SVSIMTADRI EDQALNTVVD VVNNTVGLSS SKTDNVRNGF SARGFTVQNY
QIDGVPLSWS LGGDAGETVS DVSIYERVEV VRGATGLLTG AGDPSASINL VRKHADSSDL
KGYVDVATGS WDKKQVTADV SNGLNEDGSV RGRLVAKYVN SDSYQDLYQD RKTILYGVVD
SDITANTLLR VGGSYNHNDP KGAMWGALPA VFSDGSATDW DTSATTAADW SRWETKNINY
FANLNHYFSN GWQLVANYNR MEYETTTKMI YMSGMLDKDT GVGLSGQRYH SHGESNSNNF
DVQLKGDYDL FGQTHEFVTG ALYSKQKSYA DTYEPIRDDM TGWDSQVVDN FYEWQQNQFA
EPEWSSNANR QLNMDTEQKG FYAATRLTIT DDFKLIAGGR ISSWNREGVS YGTDTNFGDD
GVFVPYVGAL YDINDAHRIY ASYTGIFNPQ NNFDADQNYL DPLEGKAYEL GLKSAYLDDR
LHTTVAVFQI DQDNLATLAG TIVIGGQPVN YYEAAQGTKS KGFELEVVGE PADGWNISAG
YSQFNAEDAE GKRVATTSPQ KQFKLFTTYQ FVDLLPELTI GGGVNWQSDS YSEGGGVAIK
QDAYSLVNLM ARYDLAENMD LQVNVENLLD EKYYAYMTAS GIAYSAYHYG APRNFTVSFN
YRF
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