| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0933 |
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| Symbol | |
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| ID | 4251864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1089622 |
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| End bp | 1090737 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117496 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_733070 |
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| Protein GI | 113969277 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0329289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT TGGGGAGTCT ATTGCTTGCG GTATTACTGA TTGGACTCGG TGGGTGTAAT
CCTGCGCCTT CACAGACCGA ACAGATTTCT GCATCGCCCC ATCCTGACTC GACTCCCGTC
AAAGAGGTGA TTGAGTGGCG CTTAGCCACA TCGTGGCCGA AAAACTTCGC CGGTTTAGGT
ATGGCGCCTG AGCGTTTTGC TAAGTTGGTG AACGACATGT CCCATGGCCG TTTACAAATT
CATGTATATG GCGCGGGTGA GTTAATGCCG GCCTTTGCGG TATTCGACGG GGTGAGCCAA
GGTAAAGTGC AGATGGCCCA CGCCGCCTCC TATTATTGGA AGGGGAAAGC GCCCGCCTCA
CAGTTTTTTT CTTCTATCCC TTTTGGCATG ACGGCCCAAG AGATGAACGG CTGGCTGCAT
TATGGTGGCG GCATGGCACT GTGGGAGGAA GTCTATCGTC CCTTTGGTAT TATTCCATTA
GCGGGTGGCA ATACGGGCAT GCAGATGGGC GGCTGGTTTA ATAAACCCAT CAACACTATT
GCCGACTTTA AAGGCTTGAA GATCCGTATG CCAGGCCTAG GGGGCGAAGT GCTGAAACGT
GTCGGTGCCG TTCCCGTCAA TATGGCTGGC AGGGAGCTTT ATGGCGCTTT GCAAACGGGG
TCGATTGATG CGGCGGAGTG GGTTGGGCCA GTAAACGATC TTGCCTTTGG CTTACATAAA
GTCGCCAAAT ATTACTATTA TCCCGGCTGG CATGAGCCTG GCTCCAATAT GGAGTTTTTG
ATCAATAAAG CCGCTTTTGA GAGTCTGCCC GAAGATTTAC AGGCCATAGT CAAAGGCGCG
GCGCGTGCTA TCAATCAAGA TATGTTGGAC GAATACACCA CGCGTAACGT GACAGCCCTT
GAAACCTTAG TAAAAGACGA GGGTGTGGTG CTGAAGGCAT TCCCGCCCGA GGTGCTTAGC
GAGCTTGAAC GTATTTCACA GCAGGTCATT GAAGAGCAGG CGGAGCAGGA CCCTATGATG
CGCAAAGTGT ACCGCGCTTA CCATGCGTAT GAGCAAGGTG TACGTGAGTA TCATAAAATT
TCTGAAGATG CTTACAGCCA ACAGCGGCAG CATTAA
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| Protein sequence | MRHLGSLLLA VLLIGLGGCN PAPSQTEQIS ASPHPDSTPV KEVIEWRLAT SWPKNFAGLG
MAPERFAKLV NDMSHGRLQI HVYGAGELMP AFAVFDGVSQ GKVQMAHAAS YYWKGKAPAS
QFFSSIPFGM TAQEMNGWLH YGGGMALWEE VYRPFGIIPL AGGNTGMQMG GWFNKPINTI
ADFKGLKIRM PGLGGEVLKR VGAVPVNMAG RELYGALQTG SIDAAEWVGP VNDLAFGLHK
VAKYYYYPGW HEPGSNMEFL INKAAFESLP EDLQAIVKGA ARAINQDMLD EYTTRNVTAL
ETLVKDEGVV LKAFPPEVLS ELERISQQVI EEQAEQDPMM RKVYRAYHAY EQGVREYHKI
SEDAYSQQRQ H
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