| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0909 |
|---|
| Symbol | |
|---|
| ID | 4251700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1060649 |
|---|
| End bp | 1061740 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638117472 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_733046 |
|---|
| Protein GI | 113969253 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00179002 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.193933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTA TAATAAAGCA ATTTTTCTAT AAGAGCCATG AAATGACCTT ATCCGACTCG
AGATTTATTT CCCTTAATCA GTGGCTGAAC CGTTATTTTT CCTATGATGT GACCCCGATT
CTGATTTCCG GTGACGCCAG TTTTAGGCGC TATTTCCGGG TCACGGACCG CGATGCGAGC
TACATTGTTG CCGATTCGCC GCCCGCCTTA GTGCCTATCG CACCTTTTAT CGCCCTCGCC
AGTGCCTATG CGGCGGCGGG ACTGACAGTT CCAAAAGTCA TCGCCTCCGA TGCCGAGCAA
GGCTTTATGC TTCTGAGCGA TCTTGGGGAT ACTCAGTTGT TGTCTGTGCT GACCGATGCG
AATGTGGCTG ACTACTATCG CCGCGCCTTG GCATTATTGC CTCAGGTGGC CTCAGTGGTT
GAGAGCCTTG ACCCTGTCAC TGGCAGCACG CAGCCATTGC CTTTATATGA TGAGGCGTTT
GTGCGCCGTG AGCTGGGGAT TTTTACCGAG TGGCTGTTAG AGAGACATTT ACAGCTTGAA
CTTAGCCATG AGGAACGCTC ACTGGTAGAG CAGAGTTTTG ACCTCTTGGT GGAAAATGCC
CTCGCACAAC CTAAGGTGGG GATGCACCGC GATTACCACA GCCGTAACTT GATGCTCAAA
GAGGGCGAGC TGTGCGTGAT TGATTTTCAA GATGCGGTGC TAGGGCCTGT GACCTACGAT
GCAGTGTCAT TACTGCGGGA TTGCTATGTG CGTTGGCCGC AAACCATGGT GCAGGAATTA
ATGCAGCAGC ATTATCAACA AGTGCTTGAG TTGGGGCAAA TCCCGGCGCA GACATCTTTT
ATCCAGTATC AAACCTGGTT TGATTTAATG GGGCTGCAGC GCCATATCAA GGCGGCGGGG
ATTTTTGCGC GTTTACACTA TCGTGATAAC AAGCCCGCCT ATATGGCCGA TATTCCGTTA
ACCTTGTCGT ATATTGTGGA TATTGCCAAC CTTTATCCAG CGCTCACACC ATTTTCCGCT
TGGGTGCAAT CGCGCATAGT GCCTGCGTTT ATGGCCAAGG GAAAAGATAC TCAGCAGGGA
GACAAGCAAT GA
|
|---|
| Protein sequence | MPAIIKQFFY KSHEMTLSDS RFISLNQWLN RYFSYDVTPI LISGDASFRR YFRVTDRDAS
YIVADSPPAL VPIAPFIALA SAYAAAGLTV PKVIASDAEQ GFMLLSDLGD TQLLSVLTDA
NVADYYRRAL ALLPQVASVV ESLDPVTGST QPLPLYDEAF VRRELGIFTE WLLERHLQLE
LSHEERSLVE QSFDLLVENA LAQPKVGMHR DYHSRNLMLK EGELCVIDFQ DAVLGPVTYD
AVSLLRDCYV RWPQTMVQEL MQQHYQQVLE LGQIPAQTSF IQYQTWFDLM GLQRHIKAAG
IFARLHYRDN KPAYMADIPL TLSYIVDIAN LYPALTPFSA WVQSRIVPAF MAKGKDTQQG
DKQ
|
|---|
| |