Gene Shewmr4_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0908 
Symbol 
ID4251699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1058236 
End bp1060533 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content49% 
IMG OID638117471 
Productorganic solvent tolerance protein 
Protein accessionYP_733045 
Protein GI113969252 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.25202e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.177324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GTTACTTTCT GGCCTTGAGC CTGTTACCGC AACTAGTCCT GGCAGACGAA 
TCTCCAACAG CCTCAGCGTC ACAATGTGTC ATCGAACCGC CAGTACCTCG TATCGTATCT
CAACCCGGCC TAAGCGCCGC GGATCAAGAG AAAATTCGTA TTGTTTCGGA TCGCTCAAAC
GCCGAAATGG GCAAACAAGC CATTTTTACC GGTGATGTGG TCTTCAGTCA GGGCGACAGA
CACATTGCCG CCGATGAGGC GATTCTCGAT CAGGCGACCG AGCAGTTCGA TGCCAATGGC
AACCTCGTCT TCCAAGACAA TATTTTTACC GTTACCGCCG ATTCGCTGCA GGCACAGATG
CGCAGCAACC GCGCCACCCT AAAGGGTGCC CAGTATTGGC TCCATGGTCA GCAGGTTCAC
GGCGATGCCG AAAAACTGCA AATCACCATG AATAACAACC TTATCTTGAC CAACACTAAC
TTCACGACCT GCCCGCCGGA CAATGTCTCT TGGCTGCTCG AAGCGGAAAA AATTAAGATT
AACAGTGAAG AAGAATGGGG CGAGATTTGG AATGCAAAGC TGAGAATTGC CGATATTCCG
GTGTTCTACA TTCCTTATAT GACGGTGCCA GTTTCCGATA AACGTAAAAC CGGCTTCCTC
TACCCTAGCT TTAGCACTAG TACCACCAAC GGTTTTGAAG TTTCCGCGCC CTATTATTGG
AATATCGCGC CTGAGTATGA CCTCACCTTT ACACCTAACT ATATGTCTAG CCGTGGTTTA
TTCACTAAGA CAGAGTTTCG CTATCTCGCG GGTGAGGCCC AAAGTGGCCG CTTGAATCTA
GAGTATTTGG GCAACGATCA GATGCTCAGC GGTAGTCCAA ATCGTTACCT CTATAACTGG
CAACACCAAG GCGCCATCGA TAAAAACTGG CGGGTACTTG CCAACTTTAC CGAAGTGTCT
GACAACAACT ATTTCAACGA CTTAAAGTCT GATGTGAACC GCGCCACCGA TAACCAGTTA
TCGCGGATTG GTGAAGTCAG CTACTTTGAG CGTAACTGGG ATATCAGCAC GCGGGTGCAA
GACATTAAAG TACTGGGTGA GGACGAAAAG CCTTATCAAG TGATGCCGCA GGTGAATTTT
AACTACCGCG CCGCCGACTT TTGGAACAAC TTGGACTTTG GCTTTAACTC TGAGTTGACC
AACTTCGCCC ATGATGACAG CGATATGAAT ACCGCCACCC GTTTGCATAT GGCGCCTAGC
CTGACGCTAC CTATTCATGG TCCTTCAGGT TCGCTGACTA GCCAAGTCAA ACTGATGCAA
ACCAACTATT GGCAGGAACA AAATAACAGT GCCTTCGATG GTTTAGACGA TACAGTGAGC
CGCACGATTC CACAGGTGCG GATCAATGGA CAGATCAACT TCGAGCGTTT TACCGAACTG
TTCGATCAAA ACTACCGTCA GACACTCGAA CCTCAGTTCC AGTATTTGTA CGTGGGTTAT
GAAGATCAAC GTGGCATCGG CATTTACGAT ACCGCCCAAT TGCAGGACGA CTACTTTGGT
CTGTTCCGCG ACCGCCGTTT CTCAGGTCTT GACCGCATCG CCGATGCAAA CCAAGTGACC
CTAGGTGTGA CCACGCGTTT CTTCGACGAT CACAACCAAG AGGCGACTAA GTTCAGCCTA
GGTCAGATCC TCTATCTGCA GGACAGTAAG CTGGGTTACG AAGATAACCT CTTCGAGCAA
AATCAATCGA CCTCAGTATT GGCCGCCGAG TTAGATACCC GCTTAAGCCA TGACTGGTAT
TTAGGTGCGG CGATTCAATA CGACACCAAC TCGAGCAATA ACAAGAAGAC CGAAGTCACC
TTAGACTTCC GCCCCGAAGC CAATAAACTA TTGCAGCTCA GTTATCGTTA TGTACCGGAT
CTATTGAACT CCAACACTAA CGATCTGGTG AATATTTCCC AAGCGGGTGT GCGTGGCGCA
TGGCCAATTA ACGACAGCCT GTATTTTGTC GGTAACTGGT ATTACGACCT CAACGAGAGC
CGCAGCATAG AAACCTATAC AGGTTTCCAA TATGAATCAT GCTGTTATGC AATCCGCCTC
AGCTATCACT ACCGAATTAA GACCAATTAC GATGACAACA TTGGTTCGGC CGTTATCGAT
GAGCGCGAGC AATTTGAAAG CGGTGTTTAC CTGAATTTAG TCATCAAAGG ACTCGGTGGT
TCAGGCCCAT TAGGCGTATC GGATATGCTC AATGATGGTC TGTTTAACTA CAGAAAACCG
CTTTATCTGA GGAATTAG
 
Protein sequence
MQIRYFLALS LLPQLVLADE SPTASASQCV IEPPVPRIVS QPGLSAADQE KIRIVSDRSN 
AEMGKQAIFT GDVVFSQGDR HIAADEAILD QATEQFDANG NLVFQDNIFT VTADSLQAQM
RSNRATLKGA QYWLHGQQVH GDAEKLQITM NNNLILTNTN FTTCPPDNVS WLLEAEKIKI
NSEEEWGEIW NAKLRIADIP VFYIPYMTVP VSDKRKTGFL YPSFSTSTTN GFEVSAPYYW
NIAPEYDLTF TPNYMSSRGL FTKTEFRYLA GEAQSGRLNL EYLGNDQMLS GSPNRYLYNW
QHQGAIDKNW RVLANFTEVS DNNYFNDLKS DVNRATDNQL SRIGEVSYFE RNWDISTRVQ
DIKVLGEDEK PYQVMPQVNF NYRAADFWNN LDFGFNSELT NFAHDDSDMN TATRLHMAPS
LTLPIHGPSG SLTSQVKLMQ TNYWQEQNNS AFDGLDDTVS RTIPQVRING QINFERFTEL
FDQNYRQTLE PQFQYLYVGY EDQRGIGIYD TAQLQDDYFG LFRDRRFSGL DRIADANQVT
LGVTTRFFDD HNQEATKFSL GQILYLQDSK LGYEDNLFEQ NQSTSVLAAE LDTRLSHDWY
LGAAIQYDTN SSNNKKTEVT LDFRPEANKL LQLSYRYVPD LLNSNTNDLV NISQAGVRGA
WPINDSLYFV GNWYYDLNES RSIETYTGFQ YESCCYAIRL SYHYRIKTNY DDNIGSAVID
EREQFESGVY LNLVIKGLGG SGPLGVSDML NDGLFNYRKP LYLRN