| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0900 |
|---|
| Symbol | |
|---|
| ID | 4251691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1050148 |
|---|
| End bp | 1050630 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638117463 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_733037 |
|---|
| Protein GI | 113969244 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.131279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.732147 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTG CTATGATAGC CGCGATGGCA AACAATCGAG TCATCGGAAA AGACAACAAA
ATGCCATGGC ATCTGCCCGA AGATTTACGC CACTTTAAAG CCATGACCTT AGGCAAACCT
GTAGTCATGG GACGTAAAAC TTTTGAGTCC ATCGGTCGCC CTCTGCCTGG GCGCCACAAT
ATTGTGATTT CCCGCCAAGC GGATTTGCAG ATTGACGGTG TGACCTGTGT GACCTCATTT
GAAGACGCTA AACTGGCGGC GGGCGAGTGT GAAGAGTTAG TCGTTATCGG TGGTGGGCAG
TTGTATCAGC AATTATTACC TCAAGCCGAC ACACTCTACC TGACGCAAAT TAGCTTAGAT
GTTGAAGGCG ATACTTTTTT CCCTGCTTGG GATAGCGATA AATGGCAAGA AACCGAATCG
GTAACTGGTA TAAATGGCGA TGGGCTGGAA TATCGCTTTA TCAATTTGAC AAAAAAATGT
TAA
|
|---|
| Protein sequence | MRIAMIAAMA NNRVIGKDNK MPWHLPEDLR HFKAMTLGKP VVMGRKTFES IGRPLPGRHN
IVISRQADLQ IDGVTCVTSF EDAKLAAGEC EELVVIGGGQ LYQQLLPQAD TLYLTQISLD
VEGDTFFPAW DSDKWQETES VTGINGDGLE YRFINLTKKC
|
|---|
| |