Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0898 |
Symbol | |
ID | 4251689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1048894 |
End bp | 1049655 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117461 |
Product | hypothetical protein |
Protein accession | YP_733035 |
Protein GI | 113969242 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0152477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTCGC ACAACTGCTA CTGGCCTACG GCGCTGAATC TGATTTAGTT GAAGAAATCA GCCAGCGCCT AGGTCAGGCC TTAGGATTGG CAAGTGTTGA GCTTTCCATC TCCTCTAATT CCCTCGTGTT AACCAGTTTA GTGCATGGTC GCTGTATCAC GACGACGCGT CGGATCCGCG AGCATGGCAT CAATATGACC ATAGTCTGCG AGTTGCAACG CATCTGTTTG TTGGCGGAAA AAGGTCTCTA TGGCCCCAAC GAAGTGCGTA AACGCTTAGC GCGGATTGAA CCTAAGACCT ATCCGCCGTA TCTCGTGATA TTGATGATAG GCCTGTCCTG CGCCAGTTTT TGTCACCTAT TTAATGGCGA TATTGCCGCA TCAGTTATCA CCTTTTTTGC CTCCGCGGTC GGGATGTCGG TGCGCCTTGC GATTGCCAAG CGGCATTTTA ATTTGCTGGT CAATTTTGCG GTGACGGCAT TTGTCACTAG TATGTTGGCG CAGACGGGTT ATGTATTTCA CTTGAGCGAA ACCCCGCAGG CGGCCATGGC GGCCAGTGTG TTGATGCTGG TGCCGGGTTT CCCGATGATC AATGCAATTT CTGATATGGT CAAAGGCCAT ATGAACGTGG GCATTTCCCG TTGGGGCCAT GCCACCTTGC TCACAGTGTC ATCCGTTATC GGCATCACCA TTGCGATGCA GATTGGGGGG ATCTTCCTAT GA
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Protein sequence | MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPYLVI LMIGLSCASF CHLFNGDIAA SVITFFASAV GMSVRLAIAK RHFNLLVNFA VTAFVTSMLA QTGYVFHLSE TPQAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI GITIAMQIGG IFL
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