Gene Shewmr4_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0898 
Symbol 
ID4251689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1048894 
End bp1049655 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content51% 
IMG OID638117461 
Producthypothetical protein 
Protein accessionYP_733035 
Protein GI113969242 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0152477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTCGC ACAACTGCTA 
CTGGCCTACG GCGCTGAATC TGATTTAGTT GAAGAAATCA GCCAGCGCCT AGGTCAGGCC
TTAGGATTGG CAAGTGTTGA GCTTTCCATC TCCTCTAATT CCCTCGTGTT AACCAGTTTA
GTGCATGGTC GCTGTATCAC GACGACGCGT CGGATCCGCG AGCATGGCAT CAATATGACC
ATAGTCTGCG AGTTGCAACG CATCTGTTTG TTGGCGGAAA AAGGTCTCTA TGGCCCCAAC
GAAGTGCGTA AACGCTTAGC GCGGATTGAA CCTAAGACCT ATCCGCCGTA TCTCGTGATA
TTGATGATAG GCCTGTCCTG CGCCAGTTTT TGTCACCTAT TTAATGGCGA TATTGCCGCA
TCAGTTATCA CCTTTTTTGC CTCCGCGGTC GGGATGTCGG TGCGCCTTGC GATTGCCAAG
CGGCATTTTA ATTTGCTGGT CAATTTTGCG GTGACGGCAT TTGTCACTAG TATGTTGGCG
CAGACGGGTT ATGTATTTCA CTTGAGCGAA ACCCCGCAGG CGGCCATGGC GGCCAGTGTG
TTGATGCTGG TGCCGGGTTT CCCGATGATC AATGCAATTT CTGATATGGT CAAAGGCCAT
ATGAACGTGG GCATTTCCCG TTGGGGCCAT GCCACCTTGC TCACAGTGTC ATCCGTTATC
GGCATCACCA TTGCGATGCA GATTGGGGGG ATCTTCCTAT GA
 
Protein sequence
MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL 
VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPYLVI
LMIGLSCASF CHLFNGDIAA SVITFFASAV GMSVRLAIAK RHFNLLVNFA VTAFVTSMLA
QTGYVFHLSE TPQAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI
GITIAMQIGG IFL