Gene Shewmr4_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0886 
Symbol 
ID4251677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1036792 
End bp1038222 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content49% 
IMG OID638117449 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_733023 
Protein GI113969230 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA GTGACACCCA ACACAGAGAG AACGCCAAGC GCCCCTCTGC TGAGCAATTT 
ATCCCCGTAA AAAATATCCA GGCGGACGAT AAACCAACCC CCGTGAATGG TCAGATTCAT
TTCCGAGAGC AGAAGGGTTA TTTTCAGCGC CTAAGAACCA CAATGAATAG CCTGTTAGTA
CTGCTGTTTT TTGCTCTGCC CTTTATTTCC TTTGATGGTC GGCAAGCGAT ATTGCTGGAT
GTGAGTCAGC AGCAGTTCTT CTTTTTCGGC CTCACGCTCT GGCCACAGGA TTTCACCTTA
CTCGCTTGGG TATTTATTGC CGCCGCCTTT GGGTTGTTTT TCATTACTGT GTTTTGGGGG
CGCGTCTGGT GTGGCTATCT TTGCCCGCAA ACCGCGTGGA CTTTTATGTT TGTCTGGCTC
GAGAGCCGAA TTGAGGGCAA CAGCAACAAA CGTAAATTGC TGGATAAGGC GCCATGGTCA
GCCAATAAAC TCGGTAAAAG AAGCCTCAAA CACGGCCTGT GGGGATTAGC CGCCTTAATT
ACTGGCTGTG GATTTATCGG TTATTTCATC CCCGCCCGCG AACTCTATTT GGATATTTTT
ACCGGCAACG CCGGCTTTTG GACGACCTGC TGGGTATGGT TTTTCGCGAT TTGTACTTAC
TTAAATGCTG GCTGGATGCG CGAGCAAATG TGCTTACACT GTTGCCCCTA CGCGCGTTTT
CAGGCCGTCA TGTTCGATGC CAACACTAAA ACCGTCACCT ATGATGCCGC ACGCGGCGAA
GCACGCGGCC CACGTAAGCG CAAACAACAG ACTGAACTCG GTGATTGTGT TGACTGTAAC
TTATGTGTCG AAGTCTGCCC GACGGGGATT GATATTCGCC AAGGCCTACA ATACGAGTGC
ATTAACTGCG GCGCCTGTGT CGATGCCTGT AATGAAACCA TGCAAAAATT CGACTACAAA
CAAAACCTAA TTAGCTATGT CAGCGAGAAT GAATTAAAGG GCATCACCCA TTCCAACTGG
CGCTCGCCAC GCTTTTTAGG TTACGGCGCA GCCGTTGTCA TTATGTTGGT TGTAATAGGT
TTAGATCTTT CCAGTCGCAG TGAAATTCAG CTTAACGTCA TTCGCGACAG ACAGAGCCTG
TATCGCGAAA CCGCCGATAA TAAAGTTGAA AATACCTACC AGCTGAAGAT CCGTAACAAG
ACTCAGCAAA CCAAGCAATA TCAACTCGCG GTCAACAGCG AAATGCCCTT CAGCTTAATT
GCCGATCCAG TCATTACCCT TGCTCCGGGC GAGCAATCGG ATTATCCAGT GACAGTATTA
GCCGATAAGG ATGCAATCCC AACGGGGCGC AAAATTATCG AATTCTCGGT AACGGATGTG
AGCAAACCTG AACAAAGCGT TAGCCAAGAA ACCGGCTTCT TTAGCCCTTA G
 
Protein sequence
MPKSDTQHRE NAKRPSAEQF IPVKNIQADD KPTPVNGQIH FREQKGYFQR LRTTMNSLLV 
LLFFALPFIS FDGRQAILLD VSQQQFFFFG LTLWPQDFTL LAWVFIAAAF GLFFITVFWG
RVWCGYLCPQ TAWTFMFVWL ESRIEGNSNK RKLLDKAPWS ANKLGKRSLK HGLWGLAALI
TGCGFIGYFI PARELYLDIF TGNAGFWTTC WVWFFAICTY LNAGWMREQM CLHCCPYARF
QAVMFDANTK TVTYDAARGE ARGPRKRKQQ TELGDCVDCN LCVEVCPTGI DIRQGLQYEC
INCGACVDAC NETMQKFDYK QNLISYVSEN ELKGITHSNW RSPRFLGYGA AVVIMLVVIG
LDLSSRSEIQ LNVIRDRQSL YRETADNKVE NTYQLKIRNK TQQTKQYQLA VNSEMPFSLI
ADPVITLAPG EQSDYPVTVL ADKDAIPTGR KIIEFSVTDV SKPEQSVSQE TGFFSP