| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0883 |
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| Symbol | |
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| ID | 4251674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1033621 |
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| End bp | 1035225 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117446 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_733020 |
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| Protein GI | 113969227 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000227614 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACG ATCAAGAGTC ACAACTCGAA CTTGGCAAAT ACTCATCACT CATAGACTTA
ATCGAACGCA CTAGCCAACG CTTTGGCGAT AAAACGGCAT ATGCTTGTTT GGGGAAAACC
AGCAGCTTCA ATGATATAGA GCGCGATTCA CGCTATTTTT CCGCCTATTT GCAGAATAAC
ACTAACCTAA AACCCGGCGA TCGGATCGCG ATTCAATTAC CCAATATTAC CCAGTTCGTT
ATCGCCGCCT ATGGTGCGCT GCGGGCGGGA CTTATTCTGG TCAACACTAA CCCGCTCTAC
ACCGAACGAG AGCTTATTCA TCAGTTTAAT GACTCAGGTG CTAAGGCCTT AGTGGTGCTT
TCGGATCTGT TGCCAACCCT TGCCAAAGTA GTTGCGACCA CACCAATTGA ATTAGTGATT
TCCACTCACC CATTAGATCT TATCGATCCG CAGGTGCAGC CCAAAACGGG GCTTAAAAAT
GTCGAATTTT GCCAAGTGCT AAAACAAGGG GCAGAGCTGC CCTTTAACCG AATAGTCCCT
GCCGCAGGTG ACTTAGCGGC GCTGCAATAT ACAGGTGGTA CAACAGGCCT CTCCAAGGGC
GCCATGCTGA CCCACGGTAA TATGCTCGCC AATGCGGCGC AGGTAAAATC CCGCATCGGC
AGCGTTATCA GCGAAGGGGA AGATATTTTT GTCGCGCCAC TGCCGATTTA CCATATTTAC
GCCTTTATGG TGAACTTAGT TCTGTATTTT GAATGTGGTG GTTGCTCGGT ATTAATCCCC
AATCCCCGTG ATATTAGTGG CTTAATTAAG ACACTGGCGA AATACCCTTT TACTGGCTTT
GCAGGGCTTA ACACCCTCTT TGTCGCCCTG TGCCATCAGC CCGAATTTAA GGCGCTAGAT
TTCAGTCATT TAAAAATCAC TATTTCGGGT GGTACGGCAC TCACCGCGGC CGCAGCCAAT
ATCTGGCAGC AAACCACGGG CAATACCATC AGTGAAGGCT ATGGATTATC CGAAACCTCG
CCGGTGATTT CACTCAATGC TCCCGGATAT CAAAAGATTG GCACTATCGG TAAGCCCGTT
CTCGGCACCG AGGTCAAACT GTTAGATGAA AACGGCAATG AAGTCGCGCA AGGGGAAGCC
GGCGAACTCG CTGCCCGCGG CCCGCAAGTG ATGCTGGGTT ATTGGAATAA TCTCCAAGAA
ACGGCCAATG TAATGACTGC CGATGGTTTC TTTAAAACCG GGGATATTGC GATTTTGAAC
GAGGAAGGAT TCCATCAAAT CGTTGATCGC AAAAAGGATA TGATTATCGT CTCCGGCTTT
AACGTCTATC CGAATGAGGT CGAAAACGTG CTCGCCAGCC ATCCGAATAT CATTGAATGT
GCCGTGGTTG GTGTAAAGGA TGAACACTCA GGAGAAGCGG TCAAAGCCTT TGTTGTACTT
AAGGATGACA GCCAAGATCA TGAGCAAATG AAAACCGCCA TTATCAACTT CTGCCGCGAG
CAACTCACCG CCTACAAGCT GCCCAAGTTG ATTGAGTTTA TGCCACAGCT ACCTAAGAGT
ACCGTGGGTA AAATTCTGCG CCGAGAATTG AAACATCAGG CTTAA
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| Protein sequence | MAYDQESQLE LGKYSSLIDL IERTSQRFGD KTAYACLGKT SSFNDIERDS RYFSAYLQNN
TNLKPGDRIA IQLPNITQFV IAAYGALRAG LILVNTNPLY TERELIHQFN DSGAKALVVL
SDLLPTLAKV VATTPIELVI STHPLDLIDP QVQPKTGLKN VEFCQVLKQG AELPFNRIVP
AAGDLAALQY TGGTTGLSKG AMLTHGNMLA NAAQVKSRIG SVISEGEDIF VAPLPIYHIY
AFMVNLVLYF ECGGCSVLIP NPRDISGLIK TLAKYPFTGF AGLNTLFVAL CHQPEFKALD
FSHLKITISG GTALTAAAAN IWQQTTGNTI SEGYGLSETS PVISLNAPGY QKIGTIGKPV
LGTEVKLLDE NGNEVAQGEA GELAARGPQV MLGYWNNLQE TANVMTADGF FKTGDIAILN
EEGFHQIVDR KKDMIIVSGF NVYPNEVENV LASHPNIIEC AVVGVKDEHS GEAVKAFVVL
KDDSQDHEQM KTAIINFCRE QLTAYKLPKL IEFMPQLPKS TVGKILRREL KHQA
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