Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0868 |
Symbol | |
ID | 4250590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1021808 |
End bp | 1022218 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117431 |
Product | curli production assembly/transport component CsgE, putative |
Protein accession | YP_733005 |
Protein GI | 113969212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGATCGT TAAAAAAGCG GTTGTTCGTC TGCATCTTGT GTCCCTTGCT GTTTGTCAGT GCCCCTTGTG TGTTGGCCGA TGATGACATT GAAATCAGTG GATTAGTCAT AGACAGAACC TTAACCCGTT TTGGTAAGGA TTTTGGCTTT TACTATTCAA GTTATTGGCG CGAATTGCCC TTTACCCAAG GTTTTAACGT GACCCTGTAT GAGACTGTGT TTCCACAGGC GGGCACGGTT TTAACCTTAG AGGTCAACGG TACGCGCATC TACACCACGC ACTTTGGCCG CCGCGCCAAT CCGATTAAGG AAAGCGCAGA GCAGGCCATA TTGCTGACCA TTGATTACTT AGCTCAGGTT CGAGCCAATG CTATTACGGG TGATTTTTCA GGAACAACGG ACGACTTTTA G
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Protein sequence | MRSLKKRLFV CILCPLLFVS APCVLADDDI EISGLVIDRT LTRFGKDFGF YYSSYWRELP FTQGFNVTLY ETVFPQAGTV LTLEVNGTRI YTTHFGRRAN PIKESAEQAI LLTIDYLAQV RANAITGDFS GTTDDF
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