Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0848 |
Symbol | |
ID | 4251831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1003380 |
End bp | 1004204 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117411 |
Product | periplasmic binding protein |
Protein accession | YP_732985 |
Protein GI | 113969192 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATGC GACGCTTTAT TGCCCTCGGC CTGAGCTTGG CGCTGTTACC CATAGCGGCG ATGGCCGAGC CTGCAAAACG TATTATTGCG CTTTCGCCCC ACGCGGTTGA AATGCTCTAT GCCATTGGCG CGGGGGAGTC GATTGTGGCC GCGACAGATT ATGCGGATTA TCCCGAAGCG GCGAAAAAAA TCCCCAGTAT CGGGGGGTAT TATGGGATCC AGATTGAGCG GGTATTAGAG CTAAATCCCG ATCTGATTGT GGTGTGGGAC ACGGGCAATA AAGCCGAGGA TATCAACCAA CTCAAAAGCT TAGGTTTTAA ACTCTATAGC AGTTCCCCCA AGACCCTTGA GGATGTCGCC AAAGAAATTG AGGAGTTAGG AGCGCTCACG GGGCGCACAG AGCAGGCGAG CCAAGTGGCG GCCGATTATC GCAATCAGCT GCTGCAATTA CGCAGTGAGA ATGCCGCGAA ATCCGAGCCA AAGGTGTTTT ATCAGCTGTG GTCAACGCCG TTAATGACGG TCGCGAAAAA CAGTTGGATC CAGCAAATCA TCGGTGTGTG TCACGGTAAA AATGTTTTTT ACGATGCGGC GAGTGATTAC CCGCAGGTGA GCTTGGAGAA TGTGTTAATG ACCTTGCCCG AGGTGATTTT ACAGAGCGAA GAGGAAGGCA ATGTCAAAGG GGTTGATTGG AGCAAATGGA CCGAAATTCC TGCGGTTAAA AACCAGCATA TTTATCAATT AAATGCCGAC CTATTACACC GGGCAACGCC AAGGGCACTA CTCGGTGTAA AGGCAGTCTG TGATGCTTTG GATAAAGCGC GTTAA
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Protein sequence | MFMRRFIALG LSLALLPIAA MAEPAKRIIA LSPHAVEMLY AIGAGESIVA ATDYADYPEA AKKIPSIGGY YGIQIERVLE LNPDLIVVWD TGNKAEDINQ LKSLGFKLYS SSPKTLEDVA KEIEELGALT GRTEQASQVA ADYRNQLLQL RSENAAKSEP KVFYQLWSTP LMTVAKNSWI QQIIGVCHGK NVFYDAASDY PQVSLENVLM TLPEVILQSE EEGNVKGVDW SKWTEIPAVK NQHIYQLNAD LLHRATPRAL LGVKAVCDAL DKAR
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