Gene Shewmr4_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0823 
Symbol 
ID4250755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp961482 
End bp962654 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content50% 
IMG OID638117386 
Productchromate transporter 
Protein accessionYP_732960 
Protein GI113969167 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000162032 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATCCAA AGGCAAAGTT TATGCTGCAG ATATTCTTAC GTTTTTTTTC CCTTGGTCTA 
ATGAGCTTTG GTGGACCAGC GGCGCATATT GGCTATTTTC GCCAAACCTT TGTCAATGAA
CTCGCTTGGC TCGATGATAA ACGCTACGCC AGCTTGGTCG CTTTAAGCCA ATTTATGCCG
GGGCCAGGGT CGAGCCAAGT AGGATTTGCC ATTGGTTACC ATCGCGGTGG GCTTTTAGGC
GCCATTGCGG CCTTTGCTGG ATTTACCTTA CCTTCCTTTG TGTTGATGTA TCTGCTGGCC
GTGACAACCG CGGCCTGGCT AGGTAATGAA TATATGCAGG GCATCATCCA TGGCTTAAAA
CTGCTGGCGG TCGTAGTGGT TGCAGATGCT GTGCAGGTGA TGTTTAAGCA GTTTTGCCAA
CGTCAAGCCG CCCGTTTAGT TATGCTTGGC AGCGCCGCGG CGATTTTGAT TTTTCCGTTT
TTGTGGACCC AAATTGTATT GTTAATTCTT GCCGCTCTCT TAGGCTTATC ATTTCTCAGT
GCGAGTGAGA GCGAAGTGCA AAAGTCTGAA CCCATTCGCT TGAATTACCT GAGCCTCGCT
ATATTTATCG CCTTGTTTGC GGGGAGTTTT TTTGCGATTA ACCTCGGCGC CGAGGCGGGG
ATCTTTGGCG AATTCTACCG TGTCGGCAGC TTAGTCTTTG GTGGCGGCCA TGTGGTGCTG
CCACTGCTTG AAACTGCGGT GGGTGATACG ATGAGCGGCG ATCGTTTTCT CACCGGATAC
GCCTTTGCCC AAGCCGTGCC TGGGCCTATG TTTACCTTTG CCACCTTCCT TGGCGCCGAG
ATGATGCTAG ACAATCCCTT TGTCGGTGCC GCCATTGCAA CTGTAGCTAT CTTTTTACCG
GGATTTTTAT TGATGTTGGT GGGGTTAAAA AGTTGGCACG CGATTGCCGC CAGACCCAAG
ATTGCTGGCA TGCTCTCGGG CGTGAATGCT TGTGTGGTGG GATTATTGGC GGCGGCGCTG
TATCAACCCG TGTTTACCCA AGGCGTGTTA TCCGCGGTGG ATATGGCCGT AGTACTGCTT
GGTTTTGGTG CATTAAAGCT CTTTAAACCG CAGATGGTAC TGCTGGTTCT TGGCTTTAGC
GTATGCGGTA TCGGATTGAT ATTGCTTGGG TAA
 
Protein sequence
MHPKAKFMLQ IFLRFFSLGL MSFGGPAAHI GYFRQTFVNE LAWLDDKRYA SLVALSQFMP 
GPGSSQVGFA IGYHRGGLLG AIAAFAGFTL PSFVLMYLLA VTTAAWLGNE YMQGIIHGLK
LLAVVVVADA VQVMFKQFCQ RQAARLVMLG SAAAILIFPF LWTQIVLLIL AALLGLSFLS
ASESEVQKSE PIRLNYLSLA IFIALFAGSF FAINLGAEAG IFGEFYRVGS LVFGGGHVVL
PLLETAVGDT MSGDRFLTGY AFAQAVPGPM FTFATFLGAE MMLDNPFVGA AIATVAIFLP
GFLLMLVGLK SWHAIAARPK IAGMLSGVNA CVVGLLAAAL YQPVFTQGVL SAVDMAVVLL
GFGALKLFKP QMVLLVLGFS VCGIGLILLG