Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0823 |
Symbol | |
ID | 4250755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 961482 |
End bp | 962654 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117386 |
Product | chromate transporter |
Protein accession | YP_732960 |
Protein GI | 113969167 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2059] Chromate transport protein ChrA |
TIGRFAM ID | [TIGR00937] chromate transporter, chromate ion transporter (CHR) family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000162032 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATCCAA AGGCAAAGTT TATGCTGCAG ATATTCTTAC GTTTTTTTTC CCTTGGTCTA ATGAGCTTTG GTGGACCAGC GGCGCATATT GGCTATTTTC GCCAAACCTT TGTCAATGAA CTCGCTTGGC TCGATGATAA ACGCTACGCC AGCTTGGTCG CTTTAAGCCA ATTTATGCCG GGGCCAGGGT CGAGCCAAGT AGGATTTGCC ATTGGTTACC ATCGCGGTGG GCTTTTAGGC GCCATTGCGG CCTTTGCTGG ATTTACCTTA CCTTCCTTTG TGTTGATGTA TCTGCTGGCC GTGACAACCG CGGCCTGGCT AGGTAATGAA TATATGCAGG GCATCATCCA TGGCTTAAAA CTGCTGGCGG TCGTAGTGGT TGCAGATGCT GTGCAGGTGA TGTTTAAGCA GTTTTGCCAA CGTCAAGCCG CCCGTTTAGT TATGCTTGGC AGCGCCGCGG CGATTTTGAT TTTTCCGTTT TTGTGGACCC AAATTGTATT GTTAATTCTT GCCGCTCTCT TAGGCTTATC ATTTCTCAGT GCGAGTGAGA GCGAAGTGCA AAAGTCTGAA CCCATTCGCT TGAATTACCT GAGCCTCGCT ATATTTATCG CCTTGTTTGC GGGGAGTTTT TTTGCGATTA ACCTCGGCGC CGAGGCGGGG ATCTTTGGCG AATTCTACCG TGTCGGCAGC TTAGTCTTTG GTGGCGGCCA TGTGGTGCTG CCACTGCTTG AAACTGCGGT GGGTGATACG ATGAGCGGCG ATCGTTTTCT CACCGGATAC GCCTTTGCCC AAGCCGTGCC TGGGCCTATG TTTACCTTTG CCACCTTCCT TGGCGCCGAG ATGATGCTAG ACAATCCCTT TGTCGGTGCC GCCATTGCAA CTGTAGCTAT CTTTTTACCG GGATTTTTAT TGATGTTGGT GGGGTTAAAA AGTTGGCACG CGATTGCCGC CAGACCCAAG ATTGCTGGCA TGCTCTCGGG CGTGAATGCT TGTGTGGTGG GATTATTGGC GGCGGCGCTG TATCAACCCG TGTTTACCCA AGGCGTGTTA TCCGCGGTGG ATATGGCCGT AGTACTGCTT GGTTTTGGTG CATTAAAGCT CTTTAAACCG CAGATGGTAC TGCTGGTTCT TGGCTTTAGC GTATGCGGTA TCGGATTGAT ATTGCTTGGG TAA
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Protein sequence | MHPKAKFMLQ IFLRFFSLGL MSFGGPAAHI GYFRQTFVNE LAWLDDKRYA SLVALSQFMP GPGSSQVGFA IGYHRGGLLG AIAAFAGFTL PSFVLMYLLA VTTAAWLGNE YMQGIIHGLK LLAVVVVADA VQVMFKQFCQ RQAARLVMLG SAAAILIFPF LWTQIVLLIL AALLGLSFLS ASESEVQKSE PIRLNYLSLA IFIALFAGSF FAINLGAEAG IFGEFYRVGS LVFGGGHVVL PLLETAVGDT MSGDRFLTGY AFAQAVPGPM FTFATFLGAE MMLDNPFVGA AIATVAIFLP GFLLMLVGLK SWHAIAARPK IAGMLSGVNA CVVGLLAAAL YQPVFTQGVL SAVDMAVVLL GFGALKLFKP QMVLLVLGFS VCGIGLILLG
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