| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0822 |
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| Symbol | |
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| ID | 4250754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 956202 |
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| End bp | 961319 |
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| Gene Length | 5118 bp |
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| Protein Length | 1705 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117385 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_732959 |
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| Protein GI | 113969166 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.658117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000160097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAGCTTA AAATACTAAC TTGTACTATT GCTGCCGCCC TTTATGGTGC TGGTGCTATG
CAGGCTGCTG CTAGCATAGG CGATGTACAT AAACTTAAAG GTTTGCAGTT AACATCTGAT
CAAATTGCAA AGTTAAATGC CCCTGAAACG AAGATCGATG ACGCTGATTT AGGGATAGGA
CTCAACCTTC AAATTACCCC TCAAGCTAAC AAATTCGAAT TTGAGGATGG CATAACGGGT
GAGCAGATCT ATATCGTTCG TCTGAATCAA AAACCACTGG CGCAAGTCAG TACGGAACTG
TTAGCCAGCA CGACTGCCAG CAAAACCTTT GGCAAATCGT CAAACTCAAA ATTATTCGTT
GCCGGTCAAC CTGCCAGCAG CGCGGTAAAA AACTATCGTA GCCGCTTACT CGACAGCCAA
AGACAAGTGA TTGCTGACGT TCAGTCCACC GTGGGTGCCC GCCAAGTACG TCAACAATTT
ACCAATGCGG TCAACGGCTT CTCTATCGCA ATGACGCAGG AAGAGGCGCA GCGCGTGTCT
CAACTGGCCA ATGTGTCCTC GGTTCGTCGC TCTAAAACCT ATGAATTATT ATCGGATGCG
GGCCCTGAGC TAATTCAAGC CAATAAGATT TGGTCTGGTG AGGCAACAGA TTCAGTACCT
TACAAAGGTG AAGGGATTAT CGTTGGTATC GTCGATACTG GGATTAACTC GGATCACCGT
TCATTCGCCG ATGTCGGTGA TGATGGTTAC GACCACACTA ACCCATGGAA TGCGGGTAAC
TACGTAGGTG ACTGTACCAA GAGCGGTTTT GAGACCATGT GTAACGACAA GTTAATTGGC
GTTCGCTCAT ACCCTGTTAT CACTGATAAT TTCACCAGCG GAGTGTATGG CGCAACTCGT
CCAGCCGTGG GTGAAGATTA TCAAGGCCAC GGTACACACG TTGCTTCAAC CGCTGCGGGT
AACGTCCTGT TAGATGTCGA TTATGTCAAC CCTGATTCGG GGACTGAGGC ATCAGATGGT
TCCGTGATTA AGCCTAAACT ATTCCCTCGT ATGAGTGGTG TAGCGCCACA CGCGAACATC
GTTGCTTACC AAGTGTGTCA CCCTTCTAAC GCAATCAATG CAGGCTGTCC TGGTGAAGCG
TTAATTGCAG GTATTGAAGA TGCGATCAAC GATGGTGTTG ACGTGATCAA CTTCTCCATC
GGCGGTCAGG ATTCAAACCC ATGGGCTGAC GATGTGGAAT TAGCTTTCTT ATCGGCTCGC
GAAGCCGGTA TTTCCGTTGC GGTGGCTGCG GGTAACTCTG GTCAACCAGT GGGTTACAAA
GAATATTTTG GCCGAATTGA CCACGCGTCA CCTTGGTTAA TGAACGTTGC TGCTAGTACC
CATGCTCGCG AAGTTGAAAT CACCACTAAG CTGATTGACC CTATGGGCGG CAGTGAAGTG
CCAAAATGGA GCGAAATTGT TGGTGGTGCA ATCAACACGG CACCTGTCAC AGGTATGGTG
GTTAACGCTA AAAACTTTGG TGATGAATAC TGTGCTAAAC CCTTCCCAGC GGGTACCTTC
GATCTGAAAG ACGGCGACGG TAATCCAACG GATGTGATCG TGGTATGTAA GCGTAATAGC
CTAGAAGATC CCAATGCGGT AGCCCGTACT GCTAAGGCTG ATAACATCAA AGCTGGCGGC
GCAGATGGCA TGATCATGTA CAACTATGCG ACCGCCGATG CGTTGGTGCC TACCGCTTCT
TACTCTGTTC CAAGTATCCA TATTACTAAG GAAGAGTGGG ATGGTCGCTA TGATAATGGC
TTAGCGGGTT ATGGTCTAAG TGATTGGCTG GCAAAGGGTA GCAATCACAT GCTGACCATT
TCTGGCACGA CCATCGAACG TACAATGGAT CCAGAGCGTG CCGATTGGTT AGCCGCATTC
TCATCTCGCG GTCCAAGCCC ATCAACGCCT GAGGCGCTGA TCCCTGCCGT TGCTGCGCCA
GGGGTGGATA TTTATGCAGC CTTCGCCGAT GAGCACCCAT TCAGCAGTTC AGCTGCATCG
GGTGATTTTG CCTTCCTAAG TGGTACTTCA ATGGCATCGC CGCATGTAGC GGGCTCTATG
GCCTTGTTAC GTCAGGCTCA ACCAAGCTGG AGCGCGACTG AGATCCAATC TGCATTGGCG
ATGACGGCTG AAAACAAAGT GCAATACTAC CGCTTGGATG ACAAGAATGG TGATGTGGCT
TTAGCTTCAA CCTACCGTGC GGGGACTGGC CGTATCAACG TGGCCAACGC AGTAAATGCT
GGCTTTGTGA TGGATGAAAC CGTTGAACGC TTTAAAGCGG CTGATCCGCA TAATGGCGGT
GCCGTTCACA AGCTGAATAT TCCGCAGTTA GTGAACTTTG AATGTAAGCC TAAGTGTCAA
TGGATCCGTA CTATCAAGGC GACCAAAGAT GGCACTTGGA GCGTGACCAA CGGTGATGTG
ATTAACTGGA GCGTCGATTC ACGTTCACAG TTCGTCCAAA ACGGTGTGTC AATTAAAGTT
ACGCCAAACG AGTTTACTCT AGCGGCCGGC GAAACCATGG ATATCGTGGT CGAAGCATCG
ATCATGGATA CTCAAGACTG GTTCAGTAAC GCGGAAGTTG AACTGCATTC AAACTTAACC
TTCACCGAAA CCAGTGGTAG AGCGTCAGAA GCGCACTGGC CTGTGGTATT CAAATACGAC
AAAAATGGTA TGCCAGGACG CTTGAGTGCC GTGGCTCACC GTAATGAGGC AAATGCTGTC
ATCAAAGGTA TCGATTTACC TGAGGGCGAC AACATTCATG GTCGTATCTT TAGCCCTGTG
AAAGCGGAAG TGAAAACCGT TGTGCTGCCG AAGGACGGCG ATGGTAACTT CCCATGGAGT
AGCAATGCTG ATTTAACCGT CAGTATGGAC GAGCGTATCG ATGAAGCCAC CTATGTGGAA
ATGATTGATG TGCCTGCTAA TGCTCGCCGT TTAATCGTCG AATCCTTTGG TACGACTCAG
TCTGAACTCA GTGAAGTTTT AGACAAAGGT AATCTGATCG TCTTCGTTGG TAAGGACTAT
AACGGTAACG GTAAGGCCGA TCCTTTCGAA GAGCTGCTTT GTGTGTCTAA CCACATCCAA
TACAACAACT TCTGTAATAT TAACCAACCA GAAGAAGGTA AGTATTGGGC GTTGTTCTAT
AACCCAAGAA AAGGCTCTGC GAGTAACAAC TATTACAATG CGTTGGAAGA AACCTTCCAA
TATGCAACGA CAGTTGTGAT GGACCAAGTT GCCAGCGAAA TGAGTGTCGA CGTTCCTGCG
AGTAATGGTC GTGATCCGGT TGATATTACA GTTAACTGGG ATATGCCAGA GATGAAAGAA
GGTGACGTGT ACTACTCGTT ACTGGACTTT GGAACCTCAG AGGTGAACGC CGGTAACATT
GGTAAAGTTG CCTTTAAACT GGAACGCGGT GTGGACGATG TTCACTTAGA CGCAACCCAA
ACTGCGGCAG TGGCTGGCGA TCAAATTCCG TTTACCTTCG AGGTGCAACC TAACAATACT
GGCGCTGACC GTGCATTTAG CATTGTCGCG ACCATTCCGT CAGGATTTAG CCTACGTGCT
GAGGACGTTC TAAGCTCTTC AAGCACTATC GTTAAAGATG TGAAACTGGA AAATGGCAAG
CTCACCATTA GCGGTATACA ACCCGATACC AGCGAGCTTG AGCCACGTTA CAACATCACC
ACTAACGTTG ATGATGCTAT GTGCCGTACG CCGGACTTCG GTAACAAGAA ACCGGGCGGT
TACGTGAACT TAGAAGAGTT CACTATCTAC CCAATCTTCA GTGGTTTTGC GCCAGTTGAG
TATGGTGCTA ACGGTAAGGC ATTAAGTGGT AAGGATAATA ATATCCTGTA TCGCAACGGT
ATTACCTTAC CAATCAGTAC CGTCTTTAAT GGTGCCTATG ACAGTTTCCA CCTGTACAAC
AACAAAGATA GCATCAACGT TTGGAAGCAG AACCACTTGG ATATTCGTGG TCACGGTATC
GTGTCCTTAT TCCAAAATCA GCCATTCTTC TACCCATACC ATGACATCTT CCCGTACAAC
AGCTTCCCAT ACGCTTCTAT CGGTATGCTG TGGCGTGGAT TTGGTCTAGG TGCGGGGGCA
ACTCAAGATA TTCTGAGTGT GCCATTGATT AATAAGACTA CTGAACGTGC GGGTATCTCT
ATCGCGAGTA CACCAAGCGG TTGGGGTATT TTGGAATACG ATAATGCTCG TTCTTATAAG
CCTTTAGGAT ACGATGCAAA CCGTGTTTAC CAATGGGAAG AGAAGGATGA TAGGTTCGAC
TTCGAGCTGA TCTTCAACGC TAACACCCGC TTCGGTGATG GTGAATACGA ATTGATGATG
GCTTACGACA ATATCAACTT TGGTTCTCAA GATGACCGTG GTTCTATTGG TCTGCAAGGC
TTCCAAGGCG GTCTATATGC CTATGGTCCA CTGCAGAAGT ACCTAGGTGA GCAATATGCC
TTCAATAATC TGAAGGACAA AATCCACAAC GGTTTAGTGA TTTGTTATGA CTACGTTGGC
CCAGAGTCGT CACAGTTTGA AGTGACTGCA TGGACTACCG TGAAAAATAA CGCCGCTGGC
CAAGTGTTGA CGGTTGATGC GGTTAGCCAA GTTGAAGGTA TGGCCGACAT CAGCATGAGC
CACAGTGTAA CTGTGCCGTC CAATATCAGT ATTGGTGCGA TTGCCGACCA AACGATCGCG
GAAAACACTA GCCTAGAAGG TCTTAAGGTC GTGTTTGCCG ATGAGCAAAA CAGCGTGAAC
AAGATCACCG TAACAGGTGA GCACATCAGC GCTGTCGTGG ATGGCAATAC CTCTGGTTCA
AGCATCACTA TCACGCCAGA AGCTAACTTC CACGGCGACG TAGAAGTCAC AGTGACTGTG
AGTGATGTGG AAAGCCCAAC AGATGCAGCG AGCACCAGCT TTATGCTGAC CGTTGAATCC
GATGGTGTTG AGCCACCAAC TACGCCTGTA ACACCTGAAC CAAAGCCTGA CACCAACAAA
GATAGCGGTG GTGCGTTAGG TGGTTTGTCT ATGTTACTCG CACTGGGGGC ATTGATCAGA
AGAAGAAAAA CTCACTAA
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| Protein sequence | MKLKILTCTI AAALYGAGAM QAAASIGDVH KLKGLQLTSD QIAKLNAPET KIDDADLGIG
LNLQITPQAN KFEFEDGITG EQIYIVRLNQ KPLAQVSTEL LASTTASKTF GKSSNSKLFV
AGQPASSAVK NYRSRLLDSQ RQVIADVQST VGARQVRQQF TNAVNGFSIA MTQEEAQRVS
QLANVSSVRR SKTYELLSDA GPELIQANKI WSGEATDSVP YKGEGIIVGI VDTGINSDHR
SFADVGDDGY DHTNPWNAGN YVGDCTKSGF ETMCNDKLIG VRSYPVITDN FTSGVYGATR
PAVGEDYQGH GTHVASTAAG NVLLDVDYVN PDSGTEASDG SVIKPKLFPR MSGVAPHANI
VAYQVCHPSN AINAGCPGEA LIAGIEDAIN DGVDVINFSI GGQDSNPWAD DVELAFLSAR
EAGISVAVAA GNSGQPVGYK EYFGRIDHAS PWLMNVAAST HAREVEITTK LIDPMGGSEV
PKWSEIVGGA INTAPVTGMV VNAKNFGDEY CAKPFPAGTF DLKDGDGNPT DVIVVCKRNS
LEDPNAVART AKADNIKAGG ADGMIMYNYA TADALVPTAS YSVPSIHITK EEWDGRYDNG
LAGYGLSDWL AKGSNHMLTI SGTTIERTMD PERADWLAAF SSRGPSPSTP EALIPAVAAP
GVDIYAAFAD EHPFSSSAAS GDFAFLSGTS MASPHVAGSM ALLRQAQPSW SATEIQSALA
MTAENKVQYY RLDDKNGDVA LASTYRAGTG RINVANAVNA GFVMDETVER FKAADPHNGG
AVHKLNIPQL VNFECKPKCQ WIRTIKATKD GTWSVTNGDV INWSVDSRSQ FVQNGVSIKV
TPNEFTLAAG ETMDIVVEAS IMDTQDWFSN AEVELHSNLT FTETSGRASE AHWPVVFKYD
KNGMPGRLSA VAHRNEANAV IKGIDLPEGD NIHGRIFSPV KAEVKTVVLP KDGDGNFPWS
SNADLTVSMD ERIDEATYVE MIDVPANARR LIVESFGTTQ SELSEVLDKG NLIVFVGKDY
NGNGKADPFE ELLCVSNHIQ YNNFCNINQP EEGKYWALFY NPRKGSASNN YYNALEETFQ
YATTVVMDQV ASEMSVDVPA SNGRDPVDIT VNWDMPEMKE GDVYYSLLDF GTSEVNAGNI
GKVAFKLERG VDDVHLDATQ TAAVAGDQIP FTFEVQPNNT GADRAFSIVA TIPSGFSLRA
EDVLSSSSTI VKDVKLENGK LTISGIQPDT SELEPRYNIT TNVDDAMCRT PDFGNKKPGG
YVNLEEFTIY PIFSGFAPVE YGANGKALSG KDNNILYRNG ITLPISTVFN GAYDSFHLYN
NKDSINVWKQ NHLDIRGHGI VSLFQNQPFF YPYHDIFPYN SFPYASIGML WRGFGLGAGA
TQDILSVPLI NKTTERAGIS IASTPSGWGI LEYDNARSYK PLGYDANRVY QWEEKDDRFD
FELIFNANTR FGDGEYELMM AYDNINFGSQ DDRGSIGLQG FQGGLYAYGP LQKYLGEQYA
FNNLKDKIHN GLVICYDYVG PESSQFEVTA WTTVKNNAAG QVLTVDAVSQ VEGMADISMS
HSVTVPSNIS IGAIADQTIA ENTSLEGLKV VFADEQNSVN KITVTGEHIS AVVDGNTSGS
SITITPEANF HGDVEVTVTV SDVESPTDAA STSFMLTVES DGVEPPTTPV TPEPKPDTNK
DSGGALGGLS MLLALGALIR RRKTH
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