| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0818 |
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| Symbol | |
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| ID | 4250750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 952703 |
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| End bp | 953932 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117381 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_732955 |
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| Protein GI | 113969162 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000601412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATTTC AGTTCTACCG CTTGTTTATT TTTTTATTGT TGTCCTGCGG ATTAGTGATC
TGGAGCTTTG GTGAGCTCGC CGAGCATTTT GCCGAAGATA AGTACAATTA CCAAATAGAC
GTCGACGACT TACTGCAAAA CTACGATGAG CAGCTTCCAA AGATACAACG CCTCCCCATC
GGCGCCCTCT CGCTGCCGCA AAACTTAGAG GACTCGCTAC AACAGGGCGC GACTATCGCG
CTACGCCACA GTAGTGATGA ACTCTATTAC TATCACTTAG AGCAAGACAA ACAGCACATC
TTGATGTTAG GCCCAGTGCA AACCTCTATG CCCAAAGAGC GTAATACAAG TTTGATTTTA
TTAGGGCTGT ATTCATCTCT GTGCTTGGTT GCTCTATGGT GGATTTGGCC CGTATTTCGG
GATCTTAACC ATCTGCAACA GGCGGCTATC GAGTTTGGCC AATCCCCGCG CAAACGTCCC
AACGAGGTCC ATAAACACTC GGCCATTTTC CCGCTGGCCA AGGCGTTTAA CAGCGTCAGC
CACCAAATTG TCGACTTTGT ACAAATGCAT AAGGAACTAT CCCGCACCAT CTCCCATGAG
GTTCGTACAC CTTTAGCTCG GATGCGTTTT GCGTTGGAAA TCATTCGGCC ACAAATAGAC
AGCAATTATG CGCAGCGGTT AAGTGAAGAT ATTGATGATA TTGAACAACT TGCGGCAAAT
TACCTATCCT TTGCCCGCCT AGAGCATAAG GAAGAAACCT TAAATAAAGA GTCACAACCC
GTTGCCTTGT TTATGGAAAA ACTGGCGCAC AAATATGCTA TCTATCAACC CAAGTTAAAT
ATTGCATTTC ACTATGAGCC GCAGCAGGCC CACTTCGATC CCATTGCCAT GACGATTGCG
ATTCAAAACC TGATCCAAAA TGCCATGCGT TTCGCCCAGC ACGAGATCCA TGTCCACTTC
TATCGGGAGG GGAACATTAA TCGTATCAGT GTCGAAGATG ATGGTCCGGG ATTTGAGGGC
AAAGGCAAAA AGCTCGTAGT CGCCTTCGAA CGAGACAGCC AACAGAGCGA TACCAGCGGC
TATGGGTTAG GACTGTATAT CGTCAAAAAA ATTGCCACTT GGCATTATGG CACGCTGGAG
TTAAGTCGCT CGCAGGCCTT AGGCGGCGCC GAAATCAGCA TTATCTGGGA CGATGCCTTA
ACGCCTAAAG CCGAAACTGA CGCCGAGTAA
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| Protein sequence | MKFQFYRLFI FLLLSCGLVI WSFGELAEHF AEDKYNYQID VDDLLQNYDE QLPKIQRLPI
GALSLPQNLE DSLQQGATIA LRHSSDELYY YHLEQDKQHI LMLGPVQTSM PKERNTSLIL
LGLYSSLCLV ALWWIWPVFR DLNHLQQAAI EFGQSPRKRP NEVHKHSAIF PLAKAFNSVS
HQIVDFVQMH KELSRTISHE VRTPLARMRF ALEIIRPQID SNYAQRLSED IDDIEQLAAN
YLSFARLEHK EETLNKESQP VALFMEKLAH KYAIYQPKLN IAFHYEPQQA HFDPIAMTIA
IQNLIQNAMR FAQHEIHVHF YREGNINRIS VEDDGPGFEG KGKKLVVAFE RDSQQSDTSG
YGLGLYIVKK IATWHYGTLE LSRSQALGGA EISIIWDDAL TPKAETDAE
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