| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0797 |
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| Symbol | |
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| ID | 4250641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 931740 |
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| End bp | 933464 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117360 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_732934 |
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| Protein GI | 113969141 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCATA AGATAGTCCG TCGTCCAACC GTTGATGATA GCCATTTACC CGCTCACCTT
CCGCCGTTAT TAAGACAGCT TTACGCCCGC CGTGGTGTTA TGCCCAACGA ATGCGAACTG
GTGCTCAAAG GCCTGTTAAG ACCCGATACA ATGAAGGGCT TAGAACAAGC AGCTAAGCTA
ATTGCCGATG CGATGCAGCA GGATAAGTCG ATACTGATCG TCGGCGATTT TGATGCCGAC
GGTGCTACCT CGACCAGTGT GTGTTTGTTA GCGCTGAGGA TGATGGGCGC GAGCAAGGTC
GATTATCTGA TCCCCAATCG TTTCGACTAC GGTTATGGTC TGAGTCCTGA GATTGTCGCC
GTGGCGGCAT CCAAACAGGC AGAATTACTT ATTACTGTAG ATAACGGCAT TTCCTCAATT
GAGGGCGTGG CCGCCGCCAA AGCCTTTGGC ATGCAGGTGG TGATCACCGA CCATCACTTA
CCCGGCCATG AGTTACCGGC GGCCGATGCC ATAGTGAATC CCAATCAGCC CGGTTGTCAG
TTTGCCAGTA AATCCATTGC TGGCGTCGGG GTCGCCTTTT ATCTGATGAC GGCGCTTAGG
GCAGAGCTGC GCGCTCGTCA TTGGTATCAA GCCCGCGGCA TTGCTGAGCC TAATCTCGGT
ACTCTGCTGG ATATTGTTGC CCTTGGCACT GTGGCCGACG TGGTGTCGCT CGATGCCAAC
AATCGTATTC TGGTCGAGGC GGGATTGCAG CGGGTACGCA GTGGTCGATG CCGTGTGGGC
ATTACCGCCT TACTCGAAGT GGCCAAACGT AATCCTGCTC GCATTGTTGC CTCGGACTTT
GGCTTTGCCG TGGGGCCTAG GCTTAATGCC GCTGGCAGAC TGGATGAAAT GGCGCTTGGC
GTTGAAACCC TGCTGTGCGA AGACATCATG TATGCAAGGC GGATGGCGGC AGAACTCGAT
AGTCTCAACC AAGAGCGACG TGAGCTTGAG GTCGGGATGC AGCAAGAGGC GCTGAAAAGT
CTTGAATATC TAAAGCTTAA TGAAGAGCAA CTTCCGTGGG GTATTGCCCT CTTTCAAGAG
GATTGGCACC AAGGGGTTAT CGGTATTCTT GCTTCGCGGA TTAAAGATAA ATACCACAGA
CCCGTTATCG CCTTTGCCGA TGCGGGTAAT GGTGAAATTA AAGGCTCGGC GCGCTCCATC
AAAGGCTTGC ATATGCGCGA TCTACTGGAG TTGGTTAACT CGCGCCATCC TGGGCTTATC
AGCAAATTTG GCGGCCATGC AATGGCGGCG GGCTTGACTT TAAAGTCCGG TGGCTTCGCA
ACCTTTGCTA AAGCCTATGA TGATGCGGTA CGTGAACTGT TAAAGCCTGA GCAGCTCACG
GGTGAGCTTT GGTCCGATGG TGAATTAACA CCGACGGAAC TTACCCTCGA AATCGCCCAG
TTACTGCGTA ATGCCGGACC TTGGGGTCAG TCTTTCGAGG AGCCATTATT CGATGGTTAT
TTTAAGATTA TCCAGCAGCG GATCGTGGGG GAGCGCCACC TTAAATTAGT GCTTGAAACC
CCATGCAGTA CCGTGATGTT AGACGCGATT GCTTTTAATG TGGATTTACA CACTTGGCCC
GATGCGACGA TTCAACATGC GTGCATCGTC TATAAGCTGG ATGTGAACGA ATATCGCGGT
AATTTCACCC TGCAGTTGAT GGTCGAGCAA ATCGAGCCAA TGTAG
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| Protein sequence | MIHKIVRRPT VDDSHLPAHL PPLLRQLYAR RGVMPNECEL VLKGLLRPDT MKGLEQAAKL
IADAMQQDKS ILIVGDFDAD GATSTSVCLL ALRMMGASKV DYLIPNRFDY GYGLSPEIVA
VAASKQAELL ITVDNGISSI EGVAAAKAFG MQVVITDHHL PGHELPAADA IVNPNQPGCQ
FASKSIAGVG VAFYLMTALR AELRARHWYQ ARGIAEPNLG TLLDIVALGT VADVVSLDAN
NRILVEAGLQ RVRSGRCRVG ITALLEVAKR NPARIVASDF GFAVGPRLNA AGRLDEMALG
VETLLCEDIM YARRMAAELD SLNQERRELE VGMQQEALKS LEYLKLNEEQ LPWGIALFQE
DWHQGVIGIL ASRIKDKYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE LVNSRHPGLI
SKFGGHAMAA GLTLKSGGFA TFAKAYDDAV RELLKPEQLT GELWSDGELT PTELTLEIAQ
LLRNAGPWGQ SFEEPLFDGY FKIIQQRIVG ERHLKLVLET PCSTVMLDAI AFNVDLHTWP
DATIQHACIV YKLDVNEYRG NFTLQLMVEQ IEPM
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