Gene Shewmr4_0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0764 
Symbol 
ID4251275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp890252 
End bp891559 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content50% 
IMG OID638117327 
Productsodium:dicarboxylate symporter 
Protein accessionYP_732901 
Protein GI113969108 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC ATAGGTCATC AGCCCTAGGC CGGATCTGGT CTTCCTGGAT GTCAGTGCCC 
CTGTGGCTGC AAATTTTCGT TGGTATGGTG TTGGGGATTG CGGTGGGCGT CAGCTTAGGT
GAGCAGGCTT CTTACCTGAA ACCTATTGGC ACCCTGTTTG TGAATACCAT CAAGATGCTG
ATTGTGCCTT TAGTGTTTTG TTCATTGATT GTCGGTGTGA CCTCAATGGA AGACACCGCC
AAAATGGGCC GAATTGGTTT TAAATCCTTT GCGTTTTACC TTTGCACCAC CGCGATTGCG
ATCAGTTTAG GTTTAGCCGT GGGCTATGTG GTGCAACCCG GTGCGGGCGT GCCTTTACTG
CAACACGAAG CGGTGCAAAC GGCGAAAGAA GTGCCTTCGG TGATGCAAAC CCTGATTGAT
ATTGTCCCTA CTAACCCCGT TGCCGCCTTG GCGAGTGGCC AAATCCTGCA AGTCATTGTG
TTTGCCGTGG CCTTAGGGAT TGCCTTGGTC TTGATTGGCG ACCATGGAAA GCCTGCGATT
AAGGTATTTG AAAGCCTTGC CGAGGCCATG TACAAGCTTA CCGACATGGT GATGAAGCTT
GCTCCTTATG GGGTATTTGG TCTGATGGCA TGGGTCGCGG GCGAGTATGG CATCGATATG
CTGTGGCCGC TGATTAAAGT GATTATTGCC GTATATATTG GCTGTATTAT CCACGTGTTA
GGCTTCTACA GTATAGTGCT GCGCCTATTT GCCAAGCTGA ATCCACTGCA TTTTTTCAAG
GGGATCAGCA ATGCGATGGC GGTGGCATTT ACCACTTCAA GTTCGGCGGG TACCTTACCG
GCCAGCATGA AATGTGCGAG CGAATATCTC GGGGTCAATA AGAAGATCTC TAGCTTTGTG
CTGCCCTTAG GGACCACCAT CAATATGGAT GGTACGGCCT TGTATCAAGG CGTGACCGCG
CTGTTTGTGG CGCAGGCCTT TGGTATCGAT TTAACTTGGG TCGACTATCT AACGATTATT
TTAACCGCGA CCTTAGCCTC AATCGGCACC GCGGGTGTGC CGGGCGCAGG CTTAGTGATG
TTGACCTTAG TGCTTTCGAC CGTGGGCTTA CCCTTAGAAG GTGTGGCCTT GATTGCGGGG
ATTGACCGTA TTCTCGATAT GGCACGTACT GTCGTAAACG TTTCTGGTGA CTTAGTGGCG
ACGACTGTGA TTGCTAAGTC GGAAGATGAG CTGGATGTTG AACATTACAA TGCCGACATG
GTACAGAGCG CTATGATTGC CGAGCAAAAC GCCGCGACGA AAAGTTAA
 
Protein sequence
MSKHRSSALG RIWSSWMSVP LWLQIFVGMV LGIAVGVSLG EQASYLKPIG TLFVNTIKML 
IVPLVFCSLI VGVTSMEDTA KMGRIGFKSF AFYLCTTAIA ISLGLAVGYV VQPGAGVPLL
QHEAVQTAKE VPSVMQTLID IVPTNPVAAL ASGQILQVIV FAVALGIALV LIGDHGKPAI
KVFESLAEAM YKLTDMVMKL APYGVFGLMA WVAGEYGIDM LWPLIKVIIA VYIGCIIHVL
GFYSIVLRLF AKLNPLHFFK GISNAMAVAF TTSSSAGTLP ASMKCASEYL GVNKKISSFV
LPLGTTINMD GTALYQGVTA LFVAQAFGID LTWVDYLTII LTATLASIGT AGVPGAGLVM
LTLVLSTVGL PLEGVALIAG IDRILDMART VVNVSGDLVA TTVIAKSEDE LDVEHYNADM
VQSAMIAEQN AATKS