Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0764 |
Symbol | |
ID | 4251275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 890252 |
End bp | 891559 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117327 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_732901 |
Protein GI | 113969108 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC ATAGGTCATC AGCCCTAGGC CGGATCTGGT CTTCCTGGAT GTCAGTGCCC CTGTGGCTGC AAATTTTCGT TGGTATGGTG TTGGGGATTG CGGTGGGCGT CAGCTTAGGT GAGCAGGCTT CTTACCTGAA ACCTATTGGC ACCCTGTTTG TGAATACCAT CAAGATGCTG ATTGTGCCTT TAGTGTTTTG TTCATTGATT GTCGGTGTGA CCTCAATGGA AGACACCGCC AAAATGGGCC GAATTGGTTT TAAATCCTTT GCGTTTTACC TTTGCACCAC CGCGATTGCG ATCAGTTTAG GTTTAGCCGT GGGCTATGTG GTGCAACCCG GTGCGGGCGT GCCTTTACTG CAACACGAAG CGGTGCAAAC GGCGAAAGAA GTGCCTTCGG TGATGCAAAC CCTGATTGAT ATTGTCCCTA CTAACCCCGT TGCCGCCTTG GCGAGTGGCC AAATCCTGCA AGTCATTGTG TTTGCCGTGG CCTTAGGGAT TGCCTTGGTC TTGATTGGCG ACCATGGAAA GCCTGCGATT AAGGTATTTG AAAGCCTTGC CGAGGCCATG TACAAGCTTA CCGACATGGT GATGAAGCTT GCTCCTTATG GGGTATTTGG TCTGATGGCA TGGGTCGCGG GCGAGTATGG CATCGATATG CTGTGGCCGC TGATTAAAGT GATTATTGCC GTATATATTG GCTGTATTAT CCACGTGTTA GGCTTCTACA GTATAGTGCT GCGCCTATTT GCCAAGCTGA ATCCACTGCA TTTTTTCAAG GGGATCAGCA ATGCGATGGC GGTGGCATTT ACCACTTCAA GTTCGGCGGG TACCTTACCG GCCAGCATGA AATGTGCGAG CGAATATCTC GGGGTCAATA AGAAGATCTC TAGCTTTGTG CTGCCCTTAG GGACCACCAT CAATATGGAT GGTACGGCCT TGTATCAAGG CGTGACCGCG CTGTTTGTGG CGCAGGCCTT TGGTATCGAT TTAACTTGGG TCGACTATCT AACGATTATT TTAACCGCGA CCTTAGCCTC AATCGGCACC GCGGGTGTGC CGGGCGCAGG CTTAGTGATG TTGACCTTAG TGCTTTCGAC CGTGGGCTTA CCCTTAGAAG GTGTGGCCTT GATTGCGGGG ATTGACCGTA TTCTCGATAT GGCACGTACT GTCGTAAACG TTTCTGGTGA CTTAGTGGCG ACGACTGTGA TTGCTAAGTC GGAAGATGAG CTGGATGTTG AACATTACAA TGCCGACATG GTACAGAGCG CTATGATTGC CGAGCAAAAC GCCGCGACGA AAAGTTAA
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Protein sequence | MSKHRSSALG RIWSSWMSVP LWLQIFVGMV LGIAVGVSLG EQASYLKPIG TLFVNTIKML IVPLVFCSLI VGVTSMEDTA KMGRIGFKSF AFYLCTTAIA ISLGLAVGYV VQPGAGVPLL QHEAVQTAKE VPSVMQTLID IVPTNPVAAL ASGQILQVIV FAVALGIALV LIGDHGKPAI KVFESLAEAM YKLTDMVMKL APYGVFGLMA WVAGEYGIDM LWPLIKVIIA VYIGCIIHVL GFYSIVLRLF AKLNPLHFFK GISNAMAVAF TTSSSAGTLP ASMKCASEYL GVNKKISSFV LPLGTTINMD GTALYQGVTA LFVAQAFGID LTWVDYLTII LTATLASIGT AGVPGAGLVM LTLVLSTVGL PLEGVALIAG IDRILDMART VVNVSGDLVA TTVIAKSEDE LDVEHYNADM VQSAMIAEQN AATKS
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