Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0761 |
Symbol | |
ID | 4251272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 887781 |
End bp | 889073 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117324 |
Product | amino acid transporter, transmembrane |
Protein accession | YP_732898 |
Protein GI | 113969105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAG ATGCGATCAG TGTTCTCGAA ACACCTCAAA GCACGCAAGA AAACACAACA AGACACTTAC CATGGACGCG CCAAGACACG ACTTGGATGC TAAGTTTATT TGGCACCGCT GTGGGGGCGG GCATTCTATT TCTTCCAATC AATGCGGGCA TGGGCGGTTT TTGGCCCTTA GTCTTGATGG CCATTATCAT TGGGCCTATG ACCTATCTCG CGCACCGTGG CCTATCGCGC TTCGTATGTT CATCGAGCAT TCCCGGCAGT GACATTACCC AAGTGGTCGA AGAACACTTT GGGATTGGCG CGGGCAAGGC GATTACGCTG CTGTATTTTT TAGCGATTTA TCCCATCGTA TTGATCTACG GCGTGGGGAT CACTAATACC GTCGACAGCT TTATCGTCAA CCAATTGGGC ATGGCTTCAC CGCCACGTTT TTTGCTGTCT GGCATTTTGA TTTTCGGCAT GATGGCTGTG ATGGTCTCTG GTGAGCAATT TATGCTGAAG GTGACTCAGT TGCTGGTGTA TCCGCTGGTG GGCATTTTAG CCTTTATGTC CATCTATCTG GTCCCAGAGT GGAAAATGGA TGCGCTGCAA GTCGTGCCAG AAACGGGCGC CTTTTTAGGC ACAGTATGGT TAACCATTCC TGTACTGGTG TTTGCCTTTA ATCATTCTCC GGCGATTTCG CAATTTTCGG TTTCCCTTAA GCGTGACCAT GGGGCCAACG CGGCCCGTAA GGCCGATGTG ATCCTGCGTA ATACCTCGAT GATGTTAGTC GGCTTTGTGA TGTTATTCGT GTTCTCCTGC GTCTTGTCAC TGTCGCCAGA ACAGTTGGCT GAAGCGAAGT CGAAGAACCT GCCGATTTTA TCTTACCTTG CGAACGTGCA TGACAGTGGT TTTGTCAGCT ATTTCGGGCC TTTCATCGCG TTTGTGGCGA TTGTATCTTC TTTCTTTGGC CACTACATGG GGGCGACTGA GGGCATGAAG GGCATTATCG TTAAGCAGCT GCGTTCAAGT AACAAACAAA TCAGTGAGAA CAAGCTGAAC AATTTTATCT TAGTGTTTAT GTTTGCCACG ATTTGGGCCG TTGCGATTAT AAACCCAAGT ATTTTGGGAA TGATCGAGGC GCTGGGCGGC CCGATTATTG CGGCGATTTT GTACTTAATG CCAATGTATG CCGTGTACAA AGTGCCGGCG CTGAAGGCTT ATCGAAACCG CATCAGCAAC GTATTTGTGA TTATTGCGGG CCTACTGGCG ATGACCGCCA TTCTGTTTGG TCTCCTGAGA TAA
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Protein sequence | MQKDAISVLE TPQSTQENTT RHLPWTRQDT TWMLSLFGTA VGAGILFLPI NAGMGGFWPL VLMAIIIGPM TYLAHRGLSR FVCSSSIPGS DITQVVEEHF GIGAGKAITL LYFLAIYPIV LIYGVGITNT VDSFIVNQLG MASPPRFLLS GILIFGMMAV MVSGEQFMLK VTQLLVYPLV GILAFMSIYL VPEWKMDALQ VVPETGAFLG TVWLTIPVLV FAFNHSPAIS QFSVSLKRDH GANAARKADV ILRNTSMMLV GFVMLFVFSC VLSLSPEQLA EAKSKNLPIL SYLANVHDSG FVSYFGPFIA FVAIVSSFFG HYMGATEGMK GIIVKQLRSS NKQISENKLN NFILVFMFAT IWAVAIINPS ILGMIEALGG PIIAAILYLM PMYAVYKVPA LKAYRNRISN VFVIIAGLLA MTAILFGLLR
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