| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0745 |
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| Symbol | |
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| ID | 4251431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 866983 |
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| End bp | 868359 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117308 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_732882 |
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| Protein GI | 113969089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCT CGACTCTTAA GCTAAAACCC GAACTGCTTG AGAACCTTAC CACTATGGGC
TATTACGAAA TGACGCCGAT TCAGGCGCAG AGTCTGCCAG CCATTTTAGC GGGCGAGGAT
GTGATTGGTC AGGGCAAGAC GGGTTCGGGT AAAACGGCGG CCTTCGGTTT AGGCTTGTTG
AACAAGTTAG ATGTGAAGCG TTTTCGCATT CAAACCTTAG TGCTGTGTCC AACCCGCGAA
CTGGCTGACC AAGTAGCGCA GGAGATCCGC ACACTGGCGC GTGGTATTCA CAACGTAAAA
GTGCTTACCC TCTGTGGCGG CGTGCCCATG GGGCCGCAAA TCGGTTCGCT CGAGCATGGC
GCCCACATTA TCGTTGGTAC GCCGGGGCGG ATTGTCGATC ACTTAGAGCG TAACCGTTTA
GACCTAAGCA ACCTGAATAT GCTCGTGCTT GACGAAGCCG ACCGTATGCT GGAAATGGGC
TTCCAACCCC AGCTCGATGC GATTATCGAG CAGTCGCCAC GCGAGCGCCA AACCTTGCTG
TTTAGCGCAA CCTTCCCCGA GCAGATCCAG TCGATTGCCA AGCAAATTAT GTACGACCCT
GTGATGGTGA AAGTGGCCGT GACCCACGAA AAGAGCACCA TTGAGCAGCA TTTCTACCAC
TTGGATGACG ACAAGGCGCG CATGCAGGCG CTGCAATTAT TGCTGCTGGA TCGCAAGCCC
GAGAGTGCGG TGGTGTTTTG TAATACCAAG CGCGAAACCC AAAAAGTGGC CGATGAACTC
AGCGATGCAG GCTTTAGCGT TATCGCCCTG CACGGCGACT TAGAGCAGCG TGACCGGGAT
GAAACCCTGC TGCAATTTGC CAACAAGAGC GCCTGTGTGT TGGTCGCAAC CGATGTGGCT
GCCCGTGGCC TCGATATCGA CGCACTGGAC GCGGTATTTA ACTACCATGT GGCCTATGAT
ACCGAAGTGC ATATTCACCG TATTGGCCGT ACCGGCCGTG CGGGCAGTAA GGGCGCGGCT
TTTACCTTCT TTAACGATCA AGATGGCTAC AAAATTGCGT TATTAGAAGA GTACTTAGAG
CGCGATATTC AGAGCGAAGC CTTACCATCA TTAAGTTTGC TGGGCACTGC GCCCAATGCG
CCAACCATGA TCACCCTGCA AATCGATGGC GGTAAAAAAG AGAAACTCCG CCCCGGTGAT
ATCCTCGGCG CCCTCACTGG TGAGAATGGT ATCGAAGGCT CGCAGGTCGG CAAAATCCTT
GTGACCGATT ACCGCGCCTA TGTGGCGGTG AATCGTAAAG TCGCTAAAAA GGCACTGAGT
AAGATCACCA GCGGCCGCAT TAAAGGCAAG TCCTACCGCG CGTGGTTAAT GAAATAA
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| Protein sequence | MAFSTLKLKP ELLENLTTMG YYEMTPIQAQ SLPAILAGED VIGQGKTGSG KTAAFGLGLL
NKLDVKRFRI QTLVLCPTRE LADQVAQEIR TLARGIHNVK VLTLCGGVPM GPQIGSLEHG
AHIIVGTPGR IVDHLERNRL DLSNLNMLVL DEADRMLEMG FQPQLDAIIE QSPRERQTLL
FSATFPEQIQ SIAKQIMYDP VMVKVAVTHE KSTIEQHFYH LDDDKARMQA LQLLLLDRKP
ESAVVFCNTK RETQKVADEL SDAGFSVIAL HGDLEQRDRD ETLLQFANKS ACVLVATDVA
ARGLDIDALD AVFNYHVAYD TEVHIHRIGR TGRAGSKGAA FTFFNDQDGY KIALLEEYLE
RDIQSEALPS LSLLGTAPNA PTMITLQIDG GKKEKLRPGD ILGALTGENG IEGSQVGKIL
VTDYRAYVAV NRKVAKKALS KITSGRIKGK SYRAWLMK
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