| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0717 |
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| Symbol | |
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| ID | 4251158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 836217 |
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| End bp | 837173 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117280 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_732854 |
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| Protein GI | 113969061 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.822858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG CAGTTTCGAC ACCCACTTGG GATCTGGACG CCTCAATGCC TCCACTTATG
CTCGCCAACC TATCCCACCT CGGCCTCATC AAAGTGGTCG GCGAACAGGG TCGCAGTTTT
ATCCATGGCC AAGTCACCAC GGATATCAGC TCACTCGAAG CCAACCAATG GCGCTGGGGC
GCACATTGCG ACCCTAAGGG TAAGATGCTC GCCAGCTTCC GCACCTTCGC CATCCAAGAT
GTGCTGTTGA TGCTGATGCC AAAGGACACC CTAGAGCTAG ACCTGCCGCA ACTGCAAAAA
TATGCGGTAT TTAGTAAGGC GACACTGAGC AATGCCTCTG ACGAGTGGAC CTTACTCGGT
GTGGCGGGCG AACAAGCAGT GCCGTTTGTG ACTCAACACT TCGGTGAAAT CACTGAAGAA
CTCACACTGG TTGAACATGG CGCCATCCTA AAGGATGCAG ACCGTTTTAT TCTGGTGCTA
CAGCCAGAAG CGGCAACGGC CTTAGTGGGC GAGCACACAG TCTTTGATGC CAGCGCTTGG
CAAGCGTTAG AAATCACCGC AGGTTACCCT AACCTAGCAC CAAGCCATGC CAATCAGTAT
GTTCCGCAGA TGTGTAATCT ACAGGCGATC AACGGCATTA GCTTTAACAA AGGCTGCTAC
ATGGGCCAAG AAACCGTTGC CCGGATGAAA TACCGTGGTG GTAACAAGCG CGCACTCTAT
ATTCTTCAGG GCACCACAGC ATTAACGATT AATTTAGAAA GCGTTATCGA GATTGCATTA
GAAGATGGCT ACCGCAAGGG CGGACAAATT ATTGAGTTCG TGCAGCGTGG CAATCAAGTG
TTACTGACCG CCGTGCTCGC AAACGATACC CAGAATAATG CCAAGCTGCG TTTCGCTGAT
GACGAGCAAT CCAGCTTAGG GATCCAAGCG CTGCCCTACT CGCTCGAAGA GGAATAG
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| Protein sequence | MTIAVSTPTW DLDASMPPLM LANLSHLGLI KVVGEQGRSF IHGQVTTDIS SLEANQWRWG
AHCDPKGKML ASFRTFAIQD VLLMLMPKDT LELDLPQLQK YAVFSKATLS NASDEWTLLG
VAGEQAVPFV TQHFGEITEE LTLVEHGAIL KDADRFILVL QPEAATALVG EHTVFDASAW
QALEITAGYP NLAPSHANQY VPQMCNLQAI NGISFNKGCY MGQETVARMK YRGGNKRALY
ILQGTTALTI NLESVIEIAL EDGYRKGGQI IEFVQRGNQV LLTAVLANDT QNNAKLRFAD
DEQSSLGIQA LPYSLEEE
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