| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0712 |
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| Symbol | |
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| ID | 4251153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 824282 |
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| End bp | 826951 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117275 |
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| Product | hypothetical protein |
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| Protein accession | YP_732849 |
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| Protein GI | 113969056 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTC CAGCATTAAC CCCTAAGGCA AGTGACAACA AAACCCCAAG CAGAAACCAC
CCATGGCTGC GGATCTATTG GGTATTAAAG GTCTTTCTCG CCCATTATCG CCATGCGCCG
CTACAAGCGG GCGCGATTTT GCTTGGACTT GCCCTCGCCG TGACTTTACT TATCGGGGTT
AAAGCCACCA ATGATAATGC CATTCGTAGC TACAGTGAGG CCACAGAACT CTTGAGCCAG
CGAGCCGATG TGCTCTTAAG CGCGCCCATT GGCCAAGAAA CCCTCGACGA ATCCGTGTAT
TTCAGCCTGC GCCAAGCGGG CATAAGCCAA AGCCTTGCGG TTGTCAGTGG CAGAGTGGCG
GGCCTGAACG GTCAGTTCTG GCAAATTGAA GGCAGTGATA TCGTCGCCGC GCTGACGGCA
AGCCTAAGCT CAAAAGAGGG GCAAAAGCAC AACGCCAGCA CAAAGCAAGC AGCCAATCCT
AGAATGTCGA TGGGAGCGAT GCCGCTCGCC GAGTTAATGA GTGGTGAGCC GATAGTGGTT
ATGAGTCAGA GCCTTGCCAA TAAGATCGCG CCCAATGGCC AACTCGACCT CGCGCCCGCG
TCTTTTGCAC CAGACAAGCT TAAGGTCATT AGTATCGATG ATAGCTGGGG GCTGGGCAGT
GCGATTCTGA CCGATATTTC CCTCGCCCAA AGCTTACTCG GGATGCAAGG TAAACTCAGC
TATATCGCCC TATTCAGTGA CAGGGATAAG CTCCCCGCCT TAAAGCAGCG GCTCGATACC
TTAGGCATTA CGCCGCTTCG CGCCAGTTAC AGTCAACAGG ATCAAGGCCA AGCCTTGATG
GCGCTTACCC GCAGTTTTCA TTTAAACCTC AATGCGATGA GCATGTTAGC CTTTGTGGTC
GGACTGTTTA TTGCCTATAA CGGTGTACGT TACAGCCTGA TGAAACGCCA ACGTCTATTA
ATCCAATTGC TGCAACAGGG CTTAGCGCGG CGCGAAGTTA TGCTTGCCCT GCTTGGCGAG
TTACTACTGT TGGTGGTGCT AGGCTCGCTA ATGGGATTTA TCTTAGGATT ACAGCTCAGT
CACTGGTTGC AACCTATGGT CGCTATGACC TTAGAGCAAC TCTACGGCGC CCACTTGTTG
CCGGGGATTT GGCAATGGCG TTGGTTAGCC GAGGCGATAG CCCTCACTTT AGTCGCCGCC
CTGGCCGCCT GTTTACCCTT GTATTTTGAC TTAACCCGCC AATCCCTCGC CCAAGGCGCT
AATCGTTATC AACAAACGCA AGCTCACAAC AAAACCCATG GCAGGCAGTT TATCTTAGCC
TGCGGCCTAC TCACGCTCGC CGCAATACTC ATGCCCTTCA GCCAAAGCTA TAACACCAGT
TTGGTATTGC TGGGCATGGT CGCCGTCGCG ATTCCATTGT TATTACCGCA AGTATTGCAT
TGGGGCATCA GCTTGCTGCT GCCATTGACT CGCCCCGGAC TTAAGCACTA TCTCCTTGCC
GAAACCCGCG AGCTTATCGC GCCATTGTCC CTCGCCATGA TGGCGATACT GCTGGCACTG
AGCGCCAATG TGTCGATGAA CACCTTAGTC GGTAGCTTCG AGCAAACCTT AAGAAGCTGG
TTAGAAACCC GTCTGCATGC CGATTTTTAC CTGCGCCCCA GCGCCAACCA TATGGCCGAA
GTGCGCGATA AATTAAGCCA AGATCCTCGC CTGAGTGGCC TGTATCAGCA ATGGCAAGTG
GAGGCCGAAG TATCACTCCA AGGGGCGGCA CAAACTATCC CAGTCAACCT GATTAGCCGC
GATGATGCAT CGATTCAACA CACCAGCACA CTCAAACAAA GCTTGCCGGA TCTCTGGCAA
ACCTACTTTG AAGGGCGCTA CGTGTTAGTC AGCGAACCCA TGGCCATTAA GTATCAACTG
CAACTCGGCG ATAGTTTGGC GTTAAATGTG CTAGACAAAA CCGCCAATAA TCCCGTGGTG
ATCGCAGGTA TCTACTACGA CCATGGTAAT ACCCGTAATG AGCTCATCAT CAGCCATGAG
CTATGGCAAC GGGCGCAGCT ACCCGTGTTA CCCATTAGCC TTGCGGCCAG TTTCCACTCT
GTCGAGCCAG AAGAGCAAAC CACAGCGACT CACCTCAAAC TCAGCGAGGC TGAGCTCGAT
GACCTGCAAG GGCAATTGGC CGTCACATTG GGTTTAGCGC AGGCGCAAAT TTACAGCCAA
GCCAAGATCA AGGCTCAGGC CATTGCCATG TTTAAACGTA CATTCTCAAT CACCTTAGTG
CTCAATAGCT TAACTTTGCT GGTGGCGGCC ATAGGGCTAT TTAGCGCCTG CTTGATGTTA
ACTCAATCCA GGCAAGCGCC ATTGGCGAGG CTGTATTCCC TCGGGGTAAG TCGTAACCAA
TTGCGGACTA TGGTGTTCAG CCAAATGCTG CTAGTCGTGG TCATCACTTG CCTGATGGCC
ATGCCCACAG GCGCGCTGCT CGGCTATTTA TTAATTGATA AAATCACCCT GCAGGCCTTC
GGCTGGACAA TCAAGATGAT ATGGGATTGG TTCGCCTATG GAAAAGCCAT CCTCATTGCC
TTAGTGACCT GCACCTTAGC CGTACTCTTA CCGCTTTACT GGCAAACCCG CAGGCCCTTA
ATCGCCAGTT TGCAGCAGGA AACCCTATGA
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| Protein sequence | MMSPALTPKA SDNKTPSRNH PWLRIYWVLK VFLAHYRHAP LQAGAILLGL ALAVTLLIGV
KATNDNAIRS YSEATELLSQ RADVLLSAPI GQETLDESVY FSLRQAGISQ SLAVVSGRVA
GLNGQFWQIE GSDIVAALTA SLSSKEGQKH NASTKQAANP RMSMGAMPLA ELMSGEPIVV
MSQSLANKIA PNGQLDLAPA SFAPDKLKVI SIDDSWGLGS AILTDISLAQ SLLGMQGKLS
YIALFSDRDK LPALKQRLDT LGITPLRASY SQQDQGQALM ALTRSFHLNL NAMSMLAFVV
GLFIAYNGVR YSLMKRQRLL IQLLQQGLAR REVMLALLGE LLLLVVLGSL MGFILGLQLS
HWLQPMVAMT LEQLYGAHLL PGIWQWRWLA EAIALTLVAA LAACLPLYFD LTRQSLAQGA
NRYQQTQAHN KTHGRQFILA CGLLTLAAIL MPFSQSYNTS LVLLGMVAVA IPLLLPQVLH
WGISLLLPLT RPGLKHYLLA ETRELIAPLS LAMMAILLAL SANVSMNTLV GSFEQTLRSW
LETRLHADFY LRPSANHMAE VRDKLSQDPR LSGLYQQWQV EAEVSLQGAA QTIPVNLISR
DDASIQHTST LKQSLPDLWQ TYFEGRYVLV SEPMAIKYQL QLGDSLALNV LDKTANNPVV
IAGIYYDHGN TRNELIISHE LWQRAQLPVL PISLAASFHS VEPEEQTTAT HLKLSEAELD
DLQGQLAVTL GLAQAQIYSQ AKIKAQAIAM FKRTFSITLV LNSLTLLVAA IGLFSACLML
TQSRQAPLAR LYSLGVSRNQ LRTMVFSQML LVVVITCLMA MPTGALLGYL LIDKITLQAF
GWTIKMIWDW FAYGKAILIA LVTCTLAVLL PLYWQTRRPL IASLQQETL
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