| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0694 |
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| Symbol | |
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| ID | 4251538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 801850 |
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| End bp | 802647 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117257 |
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| Product | Beta-lactamase |
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| Protein accession | YP_732831 |
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| Protein GI | 113969038 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2602] Beta-lactamase class D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000596311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.535938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGT TAGCCTTATC GGCTGTGTTG ATGGTGACAA CGATGATTGG CATGCCTGCG
GTGGCAAAGG AGTGGCAAGA GAACAAGAGC TGGAATGCTC ACTTTAGCGA ACATAAAACC
CAAGGCGTGG TTGTGCTCTG GAACGAGAAT ACACAGCAGG GTTTTACTAA CGATCTTAAA
CGGGCAAACC AAGCATTTTT ACCGGCATCG ACCTTTAAGA TCCCAAACAG TTTAATTGCC
TTGGACTTAG GTGTGGTTAA GGATGAGCAT CAGGTCTTTA AATGGGATGG ACAGACGCGA
GATATCGCCG CATGGAATCG TGACCATGAT TTAATCACCG CGATGAAGTA TTCGGTTGTG
CCTGTTTATC AAGAATTTGC CCGCCAAATT GGCGAGGCTC GTATGAATAA AATGCTGCAC
GCCTTCGATT ATGGCAATGA GGATATCTCG GGCAATTTGG ACAGTTTTTG GCTCGATGGT
GGTATTCGCA TTTCGGCTAC CCAGCAAATC GCTTTTTTAC GCAAGCTGTA CCACAACAAG
CTGCACGTTT CTGAGCGTAG TCAGCGCATC GTGAAACAAG CCATGCTGAC CGAGGCAAAT
GCCGACTATA TCATCCGAGC GAAAACCGGC TATTCGGTCA GAATTGAACC GAAAATCGGT
TGGTGGGTTG GCTGGGTCGA ACTGGATGAT AATGTGTGGT TTTTCGCGAC CAATATGGAT
ATGCCTTCCG CTGAGGGCTT AGGGTTACGT CAAAGCATTA CGAAAGCAGT GCTGAAACAG
GAAAAAATTA TTCCTTAG
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| Protein sequence | MRALALSAVL MVTTMIGMPA VAKEWQENKS WNAHFSEHKT QGVVVLWNEN TQQGFTNDLK
RANQAFLPAS TFKIPNSLIA LDLGVVKDEH QVFKWDGQTR DIAAWNRDHD LITAMKYSVV
PVYQEFARQI GEARMNKMLH AFDYGNEDIS GNLDSFWLDG GIRISATQQI AFLRKLYHNK
LHVSERSQRI VKQAMLTEAN ADYIIRAKTG YSVRIEPKIG WWVGWVELDD NVWFFATNMD
MPSAEGLGLR QSITKAVLKQ EKIIP
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