Gene Shewmr4_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0692 
Symbol 
ID4251536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp799557 
End bp800162 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID638117255 
Producthypothetical protein 
Protein accessionYP_732829 
Protein GI113969036 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.45273e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.666966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACC CGAGATCCCT ACTCAATAGC CTGCGCCGTA AAGCCATCTC ATCCACGAGT 
ATCACCTCAG CAACGGCGGC TAACTCGGCC ACGCCACAAC GCCAGCCAAA GCCACTGACA
CCCCTGCAGC AACAAATCTT GGTACGCATC GAAGACTGTT ACCAGCAGGC GGAAATCTAC
TTCAAGCGTC CATTTGCGCG GCCGCTAACT CAATTTACCC TGCGGGGACG GAGTGCGGGC
ACGGCCCATT TGCAACAGAA TCGCCTACGA TTTAATTCCG TATTACTCAG GGAAAATAGC
GAAGCCTTTT TAGCCGAAGT GGTGCCCCAC GAAATAAGCC ATTTGCTCTG TTTCCAACTC
TTTGGCAAAA CCAAACCCCA TGGCCGCGAG TGGCAATCCA TCATGCTCAA GCTGTTCAAG
GTGAGCCCCA ATACCACCCA CAGTTTCGAT ACTCAGTCGG TTAAAGGGAA AGACTTTGAA
TACCGCTGCG CCTGCGGCCC GATTCGGCTG AGCATCCGTC GCCATAATAA AGTGTTGCGT
GGTGAGACCC GTTATCTATG CAAACGCTGC CATACCCACC TCACCTTTAC CGAAGCCGCC
GAATAA
 
Protein sequence
MFNPRSLLNS LRRKAISSTS ITSATAANSA TPQRQPKPLT PLQQQILVRI EDCYQQAEIY 
FKRPFARPLT QFTLRGRSAG TAHLQQNRLR FNSVLLRENS EAFLAEVVPH EISHLLCFQL
FGKTKPHGRE WQSIMLKLFK VSPNTTHSFD TQSVKGKDFE YRCACGPIRL SIRRHNKVLR
GETRYLCKRC HTHLTFTEAA E