Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0651 |
Symbol | |
ID | 4251582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 758731 |
End bp | 759447 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117214 |
Product | two-component response regulator |
Protein accession | YP_732788 |
Protein GI | 113968995 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000404261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0778781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATC CGCACATTCT GATCGTTGAA GATGAAGCCG TTACCCGTAA CACGCTGAGA AGTATTTTCG AGGCAGAAGG GTATGTGGTA ACTGAGGCCA ATGATGGCGC AGAAATGCAT AAGGCTATGC AGGAAAACAA AATTAACCTC GTGGTTATGG ACATTAACCT ACCAGGTAAA AACGGTCTGT TGTTGGCACG TGAATTACGT GAAATCAACA ACATTGGTCT GATCTTCCTG ACAGGCCGTG ACAACGAAGT CGACAAAATC CTTGGACTTG AAATTGGCGC GGACGATTAT ATTACCAAGC CGTTCAACCC ACGTGAATTG ACGATTCGTG CTCGCAACCT TCTGACTCGT GTGAATAGCG CTGGTAACGA AGTCGAAGAA AAGAGCTCTG TCGAATACTA CCGTTTCAAC GATTGGAGCC TAGAGATCAA TAGCCGTTCT CTGGTGAGCC CACAGGGTGA ATCTTACAAA CTGCCACGTA GCGAATTCCG CGCTATGCTG CACTTTGTTG AAAACCCAGG CAAAATCTTA ACTCGTGCCG ATCTGCTGAT GAAGATGACT GGCCGTGAGT TAAAGCCACA CGACCGTACT GTTGACGTGA CTATCCGTCG TATCCGTAAG CACTTCGAGA GCTTGCCAGA TACGCCAGAA ATCATCGCGA CTATCCACGG TGAAGGCTAC CGTTTCTGCG GTAACTTAGA AGACTAA
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Protein sequence | MQNPHILIVE DEAVTRNTLR SIFEAEGYVV TEANDGAEMH KAMQENKINL VVMDINLPGK NGLLLARELR EINNIGLIFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLTR VNSAGNEVEE KSSVEYYRFN DWSLEINSRS LVSPQGESYK LPRSEFRAML HFVENPGKIL TRADLLMKMT GRELKPHDRT VDVTIRRIRK HFESLPDTPE IIATIHGEGY RFCGNLED
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