Gene Shewmr4_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0646 
Symbol 
ID4251664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp750990 
End bp751478 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content43% 
IMG OID638117209 
Producthypothetical protein 
Protein accessionYP_732783 
Protein GI113968990 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000933871 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAAA TATTTGAAAG GCTAATGTAC GCATCACGCT GGATTATGGC GCCCATTTAC 
TTGGGACTGA GTCTAGTGTT GTTGGGTTTA GGCATTAAAT TCTTCCAAGA GATCTTCCAT
ATTCTGCCGA TTATTTTTGA GATGACCGAA GTGGATCTGG TGTTGGTCAC CCTGTCCTTA
ATTGATATCA CCCTAGTGGG CGGTCTGATT GTGATGGTGA TGTTTTCTGG CTATGAGAAT
TTTGTCTCGC AGCTGGATGT CGGCGAAGAC AGTGAGAAGC TCAGCTGGTT GGGTAAATTA
GATTCAGGCT CACTCAAAAA CAAAGTGGCC GCCTCCATTG TGGCGATTTC GTCAATTCAC
CTGCTGAAAA TCTTTATGGA TGTGAAGAAT ATCGATAACG ACAAAATCAT GTGGTATTTG
CTTATCCATA TCACCTTCGT GGTGTCGGCC TTTGCCATGG GCTACTTGGA TAAAATGACT
CGTAAATAA
 
Protein sequence
MEKIFERLMY ASRWIMAPIY LGLSLVLLGL GIKFFQEIFH ILPIIFEMTE VDLVLVTLSL 
IDITLVGGLI VMVMFSGYEN FVSQLDVGED SEKLSWLGKL DSGSLKNKVA ASIVAISSIH
LLKIFMDVKN IDNDKIMWYL LIHITFVVSA FAMGYLDKMT RK