Gene Shewmr4_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0641 
Symbol 
ID4251659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp746233 
End bp747141 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID638117204 
Producthypothetical protein 
Protein accessionYP_732778 
Protein GI113968985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.81394e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTCGCC TAGGTAAGCA GCAGTTGCAA CTCTTGGAGG GCGTTTACCT TAATCGCTCT 
CCAAGGGTGA AACTCAGCCC GAATTGGCGG ACGATTTACC GCGAGTTAGA AGTGGGCGAG
CTGGATGGCG CGGAAAAATA TTTGTGCTTT GCGCCGCGGG ATTTTGAGTT GCTGCGCCAG
GGCGTGTTAG CAAAAGAGGG CGTCGATTTA CAGGCTCTGG ACTTTAATCT AGACCGTATC
GCCATGTCCG CCCAAAGCCA AAATGAAAAG CTGGCGAGTA TCCGCCCAGA AGCCGAGTAT
GTTTTGTTGA AGTATCTCGG TTTTGAATCG CCTCCTATGG GAATGTCTAC GCGTTCTTCG
TTACGCACTC CCTTAGATGA AGCAGAGCAG CTTTGCCATG ATCTTTATGT TAAAGCCATC
TTAGTGATTG AAAACCTAGA TATATTCGAT GCAATAACTC AAGCGCGCTT ACCGGCCGAA
CTTAGCCGCA TTATGGTGAT TTACCGTGGT AGTGGCCACC ATTCCCCCAT TGGTGTGCGG
CATTTTTTGC AGGCAATGGC GGGTAAAATG CCGATCATTG CCTTTACCGA TCTCGATCCC
GCAGGGCTGC AAATTGCCCA TACCTTAACG GGCATGACCC ATTGTATCGT GCCGCAGTTA
GCGCTTGTCG CGCCCAGCGA GTTACTCGCT ATCCCACAGA TTAATTCCGC TGATGACTTT
GCCAAGCAAG CGCCTCAGGC CAAATATTTA CAGTCAACCG ACTTAAAAAA TTGGCAGCAA
TTGAGTCTTT GGTTAAATCA GCAACGCATT AGCATTAAAC AGCAGCACCT GCTAGTGCAT
CGGCTTGAGC TAGTGCTACT GGCATATGAT GAGTCGTTAT CCATCCCCAT CTATCTACAA
ATACCTTAA
 
Protein sequence
MARLGKQQLQ LLEGVYLNRS PRVKLSPNWR TIYRELEVGE LDGAEKYLCF APRDFELLRQ 
GVLAKEGVDL QALDFNLDRI AMSAQSQNEK LASIRPEAEY VLLKYLGFES PPMGMSTRSS
LRTPLDEAEQ LCHDLYVKAI LVIENLDIFD AITQARLPAE LSRIMVIYRG SGHHSPIGVR
HFLQAMAGKM PIIAFTDLDP AGLQIAHTLT GMTHCIVPQL ALVAPSELLA IPQINSADDF
AKQAPQAKYL QSTDLKNWQQ LSLWLNQQRI SIKQQHLLVH RLELVLLAYD ESLSIPIYLQ
IP