| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0632 |
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| Symbol | |
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| ID | 4251529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 730982 |
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| End bp | 732280 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117195 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_732769 |
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| Protein GI | 113968976 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00946465 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0217008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTAATT CTTCACTACG TAAAGACCTC GCAGAAAGCG AAACAAAACG CAGGGAAGCC
GAGGCCGTTG TCGATTCAAT CAAAGCGAGT ATCGCGACGA TTGAGTTTAC CCCCGATGGC
ATCATCCTCG ATGCGAACCC TTTGTTTTTG AAGGCTGTAG GCTACTCACT GGATGAGATT
GTCGGTAAAC ACCATAAATT ATTTTGCGCA GCAGACTACG TAAATACCTC TGAGTATCAA
CAGTTTTGGC GCGAATTAAA ACAAGGACAG GCGAAGGAAG GTAAATTCCC TCGCGTGCAC
AAAAATGGTC AAGAGATCTG GCTCAGGGCA ACCTATTTTC CCATCAAGCT GGATGGCAAA
ATTACTAAGA TCATGAAAAC CGCGGCGGTA ATCACCGAAG ATAAATACCA GCTGGATGCA
CAGGCGGCGC TGTTTAATGC CCTGCAACGC TCGCAGGCAA TCATCGAGTT CAGCCCCGAG
GGCAATATCC TCAATGCCAA TGCTAACTTC CTAAGAACCA TGGGGTATAG CAAAGAGCAA
CTGCAGGGCA AGCATCATAG GATCTTCTGC TTCGATAACT TCCATCAGGA CAACCCCCAC
TTTTGGGACG ACCTCCAGCG CGGGCAGTAT AAGAAAGGTT TATTTGAACG TAAAAATGCC
TACGGCGATT CAGTATGGTT AGAAGCCGTC TACAACCCTG TGATCGATGA CAATGGCAAA
GTGGTAAAAG TGATCAAGTT CGCCAGCGAC ATTACCCAGA GGATCGTCAA GAGCCATGCG
ATCCGAGATG CGGCCAATAT CGCCCACGCC ACCTCGCAAA CCACGGTTGA GCAGGCTAAC
CGCGGCGTGC AGTTGCTAGA CGCGACGGTA AGCACCTCAA ACGCGATTGC GGCGCAGACT
TATAAAACCA CTGAGTCCAT GTTGAAACTC AACGAGCAAT CCCAGAGCAT TCAAGCGATT
GTCGCGACGA TCAGCGCGAT AGCCGATCAA ACCAATCTAC TGGCACTCAA TGCCGCCATC
GAAGCGGCTC GGGCGGGAGA ACAAGGTCGA GGCTTTGCCG TAGTGGCCGA TGAGGTGCGC
CAACTGGCGG CCAGAACCAG TAAATCGACC GGCGAGATTG CCGCTGTGGT GGATAAGAAC
AGCCAACTGA CCGCCAGCGC CACGAGTATG ATGAATGAGG TAGAACGAAT CGCCGAGCAA
GGCAAGCAGC AATTAGCGGA GGTCACCGCT GTGATGAGTC ATATTCGTAC CGGCGCGGAG
AATGTCGCCG AAACAGTCTC TCAACTCTCG ATTGACTAA
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| Protein sequence | MFNSSLRKDL AESETKRREA EAVVDSIKAS IATIEFTPDG IILDANPLFL KAVGYSLDEI
VGKHHKLFCA ADYVNTSEYQ QFWRELKQGQ AKEGKFPRVH KNGQEIWLRA TYFPIKLDGK
ITKIMKTAAV ITEDKYQLDA QAALFNALQR SQAIIEFSPE GNILNANANF LRTMGYSKEQ
LQGKHHRIFC FDNFHQDNPH FWDDLQRGQY KKGLFERKNA YGDSVWLEAV YNPVIDDNGK
VVKVIKFASD ITQRIVKSHA IRDAANIAHA TSQTTVEQAN RGVQLLDATV STSNAIAAQT
YKTTESMLKL NEQSQSIQAI VATISAIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR
QLAARTSKST GEIAAVVDKN SQLTASATSM MNEVERIAEQ GKQQLAEVTA VMSHIRTGAE
NVAETVSQLS ID
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