Gene Shewmr4_0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0631 
Symbol 
ID4251528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp730125 
End bp730826 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content47% 
IMG OID638117194 
Producthypothetical protein 
Protein accessionYP_732768 
Protein GI113968975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000012648 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.149121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTAT CGCCGTATTT TTCTAAGCAA AATCAATCAA TTTCTGTTTC TGCACAACAA 
GCCAGTGACT TCGCCAAGAA AATTGCCCAA GACTTCAACC CTATCCACGA TGTGGGTGCT
AAGCGTTTCT GTGTGCCAGG GGACTTGCTA TTTGCCTTAG TCTTAACTCA ATACGGCTTA
AGCCAGAATA TGAAGTTTAC CTTTGCGGGT ATGGTCGGCG ATGGCGTCGA GCTGCAATTC
CCCGAACAGG TGAGCGACAG TTTTGCAATC TGCGATAACC GCGAGAAAAC CTATTTGCAG
GTGAGTCGTC AGGGCGAGGT GAGTCGCTGC GACGCGCAAA CCGAATCTTT TATTCGCAAT
TATGTGGCGT TCTCGGGTCA CAATTTTATC GACATTCTGA TGCCTTTAAT GAAACAGCAT
CAAGTGATGA TTAATCCTGA TCGTCCCTTA GTGATTTACG AGAGCATGTC ATTCGATTTG
ACCAGCCTCG ACTTTGTAGA AGTGAGTTTA TCGCTTGTAC AACAAGAGCT TAAGATTGAC
GGTAAGCGTG GCGATGTGAC GCTGCACTTT GAGCTGCACA GCGGTGAAAC CTTAGTCGGT
ACAGGAATTA AGACCTTAGT CATGAGTGGA CTACGTGCCT ATGATGAGGT GCAAGCCCAG
CAAATGTGCG CGGCTTATGA AGGGCGTAAA ACCGAGTTTT GA
 
Protein sequence
MFLSPYFSKQ NQSISVSAQQ ASDFAKKIAQ DFNPIHDVGA KRFCVPGDLL FALVLTQYGL 
SQNMKFTFAG MVGDGVELQF PEQVSDSFAI CDNREKTYLQ VSRQGEVSRC DAQTESFIRN
YVAFSGHNFI DILMPLMKQH QVMINPDRPL VIYESMSFDL TSLDFVEVSL SLVQQELKID
GKRGDVTLHF ELHSGETLVG TGIKTLVMSG LRAYDEVQAQ QMCAAYEGRK TEF