Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0631 |
Symbol | |
ID | 4251528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 730125 |
End bp | 730826 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117194 |
Product | hypothetical protein |
Protein accession | YP_732768 |
Protein GI | 113968975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000012648 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.149121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCTAT CGCCGTATTT TTCTAAGCAA AATCAATCAA TTTCTGTTTC TGCACAACAA GCCAGTGACT TCGCCAAGAA AATTGCCCAA GACTTCAACC CTATCCACGA TGTGGGTGCT AAGCGTTTCT GTGTGCCAGG GGACTTGCTA TTTGCCTTAG TCTTAACTCA ATACGGCTTA AGCCAGAATA TGAAGTTTAC CTTTGCGGGT ATGGTCGGCG ATGGCGTCGA GCTGCAATTC CCCGAACAGG TGAGCGACAG TTTTGCAATC TGCGATAACC GCGAGAAAAC CTATTTGCAG GTGAGTCGTC AGGGCGAGGT GAGTCGCTGC GACGCGCAAA CCGAATCTTT TATTCGCAAT TATGTGGCGT TCTCGGGTCA CAATTTTATC GACATTCTGA TGCCTTTAAT GAAACAGCAT CAAGTGATGA TTAATCCTGA TCGTCCCTTA GTGATTTACG AGAGCATGTC ATTCGATTTG ACCAGCCTCG ACTTTGTAGA AGTGAGTTTA TCGCTTGTAC AACAAGAGCT TAAGATTGAC GGTAAGCGTG GCGATGTGAC GCTGCACTTT GAGCTGCACA GCGGTGAAAC CTTAGTCGGT ACAGGAATTA AGACCTTAGT CATGAGTGGA CTACGTGCCT ATGATGAGGT GCAAGCCCAG CAAATGTGCG CGGCTTATGA AGGGCGTAAA ACCGAGTTTT GA
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Protein sequence | MFLSPYFSKQ NQSISVSAQQ ASDFAKKIAQ DFNPIHDVGA KRFCVPGDLL FALVLTQYGL SQNMKFTFAG MVGDGVELQF PEQVSDSFAI CDNREKTYLQ VSRQGEVSRC DAQTESFIRN YVAFSGHNFI DILMPLMKQH QVMINPDRPL VIYESMSFDL TSLDFVEVSL SLVQQELKID GKRGDVTLHF ELHSGETLVG TGIKTLVMSG LRAYDEVQAQ QMCAAYEGRK TEF
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