Gene Shewmr4_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0608 
Symbol 
ID4251189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp700330 
End bp702810 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content50% 
IMG OID638117171 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_732745 
Protein GI113968952 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00270807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.195157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG TAATGCGAAA TTTGGGTTTA AGTGCGTTAG CCGTTGCGGT ATTGACGAGT 
TGCGCCGCCA CCTCAACTGA AACGGCGACT CCCGCGACCA CTCCACAGGT TTATCAAGTT
CCCTTAGCTC AGCCTCCCCA AGTTTCACAA CCCCTTACGC TGAATCAAAT TATGGCGAAC
CCCGATTGGA TGGGAATTTT CGCTAAGGAA GCCTACTGGA GCGATGACAG CCAGAGCGTT
TTCTTTGCCC GTCAACCTAG CGCATCGCCG CTACGGAATT ATTATCAGCA GGGCATTAAT
GACAGCCGCG CCGTTGAACT GGCCATCGAT AAGCTACACG CGGCGGACCA ACAGTTTGGC
GTGTTAGACA GTGCTAAGGC CAACAAGGCC TATCTCTATC AAGGCAATAT TTTTGTTAAG
CATTTTAGCT CAGGCAAAAT CACCCAGCTT ACCCGTCAGC GCACTGCCAT CAGTGGCCTG
CGTTACCTGA ACAATGGCGA TATCGCCTAT TGGCAAGGGG ATAATGTTTT CCAAATCCAT
CAAGACAGTG GATTAGTGGA GCAGCTGGCT GAAATCAAAA TGGCGAAAGC GCCCGAGGGC
GTGAAAGAGC CAAGCAGCTA CTTAGCCAAG CAGCAGCACA GACTCATCCA ATATGTGGCG
TTGCAGCAAG AAAATGCTAA AGCCAAAGAA CAGTTTAAGA ACGAGCTGCA AAAGAGCGAT
CCAACCCTCG CCGCTAACAC TTGGTATCTA GGGGATGCCG AGGTGGTGTC TGAGTTGAGT
CTGTCGCCAG ATGGTCGCTA TCTGTTTGTG GCCCTAACCG ATAAAAACTA CACTGGCAGC
AGTGAACACG ACATCATGCC AAACTACCTT GGCAGCGAAG GTTATATCGA TCCTGTGCCC
GTGCGCGCCC GTGTTGCAGA AGATACGCCG CCTGGCCAAC GCTTTGTGGT ACTCGATCTC
AATGAGCACA AACAGATTGA TGTGACTATC GAAGGTCTAA CCGGCTTCGA TGAGGACGTT
TTAGCTAAGG TTAAGAGTGA AAATGCTAAG GCAAAAGGTG AGTCGTATCA AAGTACAAAG
GCTCCTCGTA AAATCCAGTT GATGCAGGAT TGGGGCTGGA CTCAAAGCGC GATTCAATGG
CATGAGTCTG AGAACAAGCT GGCGGTGATG GTCGAAGCGA CCGATAACAA AGACCGCTGG
ATTGCCAGCG TCGATCTGGC AAAGGGCAAG TTTATCACCG AGCATCGCCT GCATGATGAT
GCCTGGGTGA ACTACGACTA TAACCAATTT GGCTGGTTAC CTGGTACGGA CACTCTGTAC
TATCTCTCTG AAGAAACAGG CTATTCCCAG CTTTATATCA AGGCTCGTGG CGAAAAGCCT
CGCGCTTTGA CTCAAGGTAA GTTTGTGGTG AGCGATATTA CTCTCTCGCC CGATGCAAAC
TACATCTACT ACAAGGCTAA CCAAAGTCAC CCAGGTATTT ACAACGTTCA CCGTGTGAAT
ATCGCCTCGG GCAAAAATGA GCAATTAACC CAGTGGGACG GTAACTTAGA TTACAGCTTA
AGCCCCGATG GCACTAAGTT GCTGCTGAAT GCGTCTCGCC GTACAGCGCC GAATGAGCTG
TATGTTCAAC CGATTGGCGG TGAGTTAAAA CAGCTCACGT CATACACCAG CGATGCGTTT
AAGCAATATC CATGGCAAGC GCCCGAAGTA GTAGCCGTAC CTTCTAATCA TGGCGCTGGC
CAAGTGTATG CGCGGGTTTA TTTGCCGCAG GATTACGACA AATCCCGCGC CGAGAAATAC
CCCGCCGTTA TCTTCAACCA TGGTGCGGGC TACTTACAGA ATGCCGATTA TGGTTTCAGT
GGTTACTTCC GTGAGTTTAT GTTCCACAAC CTACTGACTC AACAAGGTTA TGTGGTGATG
GACATGGATT ACCGTGGTTC CAAAGGCTAT GGCCGCGACT GGCGCACGGC GATTTATCGC
AATATGGGTC ACCCTGAAGT TGAAGACTTA AAAGACGGTG TAACTTGGAT GGGCCAAAAT
GCCAACGTGG ATATTAAACG CGTCGGTACC TATGGCGGTT CTTACGGCGG CTTCTTAACC
TTTATGTCCT TGTTTACTGA GCCTGAATTA TTCCAAGCAG GCGCGGCACT GCGCCCTGTG
GCGGATTGGG CGCATTACAA CGCGCCATAC ACCTCCAACA TTTTAAATAC ACCGGATGTT
GACCCTATCG CCTACGAGCG TAGCTCGCCC ATCGAGCATG CCCAAGGTCT GACTAAGCCG
CTACTGATCA TGAGTGGCGT GATGGATGAC AACGTGTTCT TCCAAGATAG CGTGCGCATG
GTGCAGCACC TTATCGAGCT GGAAAAACCT ATGTTCGAAA CCGCGATTTA TCCGGTAGAG
CCCCATGGTT TCCGTCAGCC ATCGAGCTGG TTGGACGAAT ATCGCCGTAT TTATAAGCTG
TTTGAACAAG AGCTTAAGTA A
 
Protein sequence
MNSVMRNLGL SALAVAVLTS CAATSTETAT PATTPQVYQV PLAQPPQVSQ PLTLNQIMAN 
PDWMGIFAKE AYWSDDSQSV FFARQPSASP LRNYYQQGIN DSRAVELAID KLHAADQQFG
VLDSAKANKA YLYQGNIFVK HFSSGKITQL TRQRTAISGL RYLNNGDIAY WQGDNVFQIH
QDSGLVEQLA EIKMAKAPEG VKEPSSYLAK QQHRLIQYVA LQQENAKAKE QFKNELQKSD
PTLAANTWYL GDAEVVSELS LSPDGRYLFV ALTDKNYTGS SEHDIMPNYL GSEGYIDPVP
VRARVAEDTP PGQRFVVLDL NEHKQIDVTI EGLTGFDEDV LAKVKSENAK AKGESYQSTK
APRKIQLMQD WGWTQSAIQW HESENKLAVM VEATDNKDRW IASVDLAKGK FITEHRLHDD
AWVNYDYNQF GWLPGTDTLY YLSEETGYSQ LYIKARGEKP RALTQGKFVV SDITLSPDAN
YIYYKANQSH PGIYNVHRVN IASGKNEQLT QWDGNLDYSL SPDGTKLLLN ASRRTAPNEL
YVQPIGGELK QLTSYTSDAF KQYPWQAPEV VAVPSNHGAG QVYARVYLPQ DYDKSRAEKY
PAVIFNHGAG YLQNADYGFS GYFREFMFHN LLTQQGYVVM DMDYRGSKGY GRDWRTAIYR
NMGHPEVEDL KDGVTWMGQN ANVDIKRVGT YGGSYGGFLT FMSLFTEPEL FQAGAALRPV
ADWAHYNAPY TSNILNTPDV DPIAYERSSP IEHAQGLTKP LLIMSGVMDD NVFFQDSVRM
VQHLIELEKP MFETAIYPVE PHGFRQPSSW LDEYRRIYKL FEQELK