Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0608 |
Symbol | |
ID | 4251189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 700330 |
End bp | 702810 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117171 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_732745 |
Protein GI | 113968952 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00270807 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.195157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG TAATGCGAAA TTTGGGTTTA AGTGCGTTAG CCGTTGCGGT ATTGACGAGT TGCGCCGCCA CCTCAACTGA AACGGCGACT CCCGCGACCA CTCCACAGGT TTATCAAGTT CCCTTAGCTC AGCCTCCCCA AGTTTCACAA CCCCTTACGC TGAATCAAAT TATGGCGAAC CCCGATTGGA TGGGAATTTT CGCTAAGGAA GCCTACTGGA GCGATGACAG CCAGAGCGTT TTCTTTGCCC GTCAACCTAG CGCATCGCCG CTACGGAATT ATTATCAGCA GGGCATTAAT GACAGCCGCG CCGTTGAACT GGCCATCGAT AAGCTACACG CGGCGGACCA ACAGTTTGGC GTGTTAGACA GTGCTAAGGC CAACAAGGCC TATCTCTATC AAGGCAATAT TTTTGTTAAG CATTTTAGCT CAGGCAAAAT CACCCAGCTT ACCCGTCAGC GCACTGCCAT CAGTGGCCTG CGTTACCTGA ACAATGGCGA TATCGCCTAT TGGCAAGGGG ATAATGTTTT CCAAATCCAT CAAGACAGTG GATTAGTGGA GCAGCTGGCT GAAATCAAAA TGGCGAAAGC GCCCGAGGGC GTGAAAGAGC CAAGCAGCTA CTTAGCCAAG CAGCAGCACA GACTCATCCA ATATGTGGCG TTGCAGCAAG AAAATGCTAA AGCCAAAGAA CAGTTTAAGA ACGAGCTGCA AAAGAGCGAT CCAACCCTCG CCGCTAACAC TTGGTATCTA GGGGATGCCG AGGTGGTGTC TGAGTTGAGT CTGTCGCCAG ATGGTCGCTA TCTGTTTGTG GCCCTAACCG ATAAAAACTA CACTGGCAGC AGTGAACACG ACATCATGCC AAACTACCTT GGCAGCGAAG GTTATATCGA TCCTGTGCCC GTGCGCGCCC GTGTTGCAGA AGATACGCCG CCTGGCCAAC GCTTTGTGGT ACTCGATCTC AATGAGCACA AACAGATTGA TGTGACTATC GAAGGTCTAA CCGGCTTCGA TGAGGACGTT TTAGCTAAGG TTAAGAGTGA AAATGCTAAG GCAAAAGGTG AGTCGTATCA AAGTACAAAG GCTCCTCGTA AAATCCAGTT GATGCAGGAT TGGGGCTGGA CTCAAAGCGC GATTCAATGG CATGAGTCTG AGAACAAGCT GGCGGTGATG GTCGAAGCGA CCGATAACAA AGACCGCTGG ATTGCCAGCG TCGATCTGGC AAAGGGCAAG TTTATCACCG AGCATCGCCT GCATGATGAT GCCTGGGTGA ACTACGACTA TAACCAATTT GGCTGGTTAC CTGGTACGGA CACTCTGTAC TATCTCTCTG AAGAAACAGG CTATTCCCAG CTTTATATCA AGGCTCGTGG CGAAAAGCCT CGCGCTTTGA CTCAAGGTAA GTTTGTGGTG AGCGATATTA CTCTCTCGCC CGATGCAAAC TACATCTACT ACAAGGCTAA CCAAAGTCAC CCAGGTATTT ACAACGTTCA CCGTGTGAAT ATCGCCTCGG GCAAAAATGA GCAATTAACC CAGTGGGACG GTAACTTAGA TTACAGCTTA AGCCCCGATG GCACTAAGTT GCTGCTGAAT GCGTCTCGCC GTACAGCGCC GAATGAGCTG TATGTTCAAC CGATTGGCGG TGAGTTAAAA CAGCTCACGT CATACACCAG CGATGCGTTT AAGCAATATC CATGGCAAGC GCCCGAAGTA GTAGCCGTAC CTTCTAATCA TGGCGCTGGC CAAGTGTATG CGCGGGTTTA TTTGCCGCAG GATTACGACA AATCCCGCGC CGAGAAATAC CCCGCCGTTA TCTTCAACCA TGGTGCGGGC TACTTACAGA ATGCCGATTA TGGTTTCAGT GGTTACTTCC GTGAGTTTAT GTTCCACAAC CTACTGACTC AACAAGGTTA TGTGGTGATG GACATGGATT ACCGTGGTTC CAAAGGCTAT GGCCGCGACT GGCGCACGGC GATTTATCGC AATATGGGTC ACCCTGAAGT TGAAGACTTA AAAGACGGTG TAACTTGGAT GGGCCAAAAT GCCAACGTGG ATATTAAACG CGTCGGTACC TATGGCGGTT CTTACGGCGG CTTCTTAACC TTTATGTCCT TGTTTACTGA GCCTGAATTA TTCCAAGCAG GCGCGGCACT GCGCCCTGTG GCGGATTGGG CGCATTACAA CGCGCCATAC ACCTCCAACA TTTTAAATAC ACCGGATGTT GACCCTATCG CCTACGAGCG TAGCTCGCCC ATCGAGCATG CCCAAGGTCT GACTAAGCCG CTACTGATCA TGAGTGGCGT GATGGATGAC AACGTGTTCT TCCAAGATAG CGTGCGCATG GTGCAGCACC TTATCGAGCT GGAAAAACCT ATGTTCGAAA CCGCGATTTA TCCGGTAGAG CCCCATGGTT TCCGTCAGCC ATCGAGCTGG TTGGACGAAT ATCGCCGTAT TTATAAGCTG TTTGAACAAG AGCTTAAGTA A
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Protein sequence | MNSVMRNLGL SALAVAVLTS CAATSTETAT PATTPQVYQV PLAQPPQVSQ PLTLNQIMAN PDWMGIFAKE AYWSDDSQSV FFARQPSASP LRNYYQQGIN DSRAVELAID KLHAADQQFG VLDSAKANKA YLYQGNIFVK HFSSGKITQL TRQRTAISGL RYLNNGDIAY WQGDNVFQIH QDSGLVEQLA EIKMAKAPEG VKEPSSYLAK QQHRLIQYVA LQQENAKAKE QFKNELQKSD PTLAANTWYL GDAEVVSELS LSPDGRYLFV ALTDKNYTGS SEHDIMPNYL GSEGYIDPVP VRARVAEDTP PGQRFVVLDL NEHKQIDVTI EGLTGFDEDV LAKVKSENAK AKGESYQSTK APRKIQLMQD WGWTQSAIQW HESENKLAVM VEATDNKDRW IASVDLAKGK FITEHRLHDD AWVNYDYNQF GWLPGTDTLY YLSEETGYSQ LYIKARGEKP RALTQGKFVV SDITLSPDAN YIYYKANQSH PGIYNVHRVN IASGKNEQLT QWDGNLDYSL SPDGTKLLLN ASRRTAPNEL YVQPIGGELK QLTSYTSDAF KQYPWQAPEV VAVPSNHGAG QVYARVYLPQ DYDKSRAEKY PAVIFNHGAG YLQNADYGFS GYFREFMFHN LLTQQGYVVM DMDYRGSKGY GRDWRTAIYR NMGHPEVEDL KDGVTWMGQN ANVDIKRVGT YGGSYGGFLT FMSLFTEPEL FQAGAALRPV ADWAHYNAPY TSNILNTPDV DPIAYERSSP IEHAQGLTKP LLIMSGVMDD NVFFQDSVRM VQHLIELEKP MFETAIYPVE PHGFRQPSSW LDEYRRIYKL FEQELK
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