Gene Shewmr4_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0596 
SymbolmutL 
ID4251719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp688666 
End bp690600 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content52% 
IMG OID638117159 
ProductDNA mismatch repair protein 
Protein accessionYP_732733 
Protein GI113968940 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0279132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.83924e-08 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGGATCC AGATCCTTCC GCCGCAACTA GCCAACCAAA TCGCCGCCGG TGAGGTGGTC 
GAACGGCCTG CTTCCGTGGT GAAGGAACTT GTCGAGAACA GCCTAGATGC TGGGGCGACG
CGTATCGATA TCGAAATCGA TAAGGGCGGC AGCAAGCTGA TTAAGATCCG TGACAATGGT
TCGGGGATCC CAAAGGATGA GCTGGCTTTG GCCTTGTCGC GCCATGCCAC CTCGAAACTG
CACTCCCTTG ACGACCTTGA AGCCATCCTC AGCTTTGGTT TTCGCGGCGA GGCATTGGCG
AGTATCAGCT CTGTGTCCCG CTTAACCTTG ACCTCGCGTA CGGCCGAGCA AACGGAAGCC
TGGCAGGCTT ATGCCGAAGG CGTCGACATG GCGGTTAAGG TCATGCCGGC CGCGCATCCT
GTTGGTTCAA CTATCGAAGT TGTCGATCTG TTCTTTAATA CGCCCGCCCG TAGACGTTTT
CTTAAAAGCG ATAAAACCGA ATTTACTCAT ATCGATGAAT GGTTAAAACG CATTGCGTTA
GTGCGTGGGG ATATCCACTT TACCTTGACC CACAATGGCA AAACCGTACG TAACTATCGT
CCGGCGATGA ATGAGCCGCA GTATTTGCAG CGATTGACTC AGGTTGCTGG ACGCCAATTT
GCCGATGAGG CGTTGCGGGT CGAATGCCAA CACGATGACC TACGTTTAAG TGGTTATTTG
CAGTCGCCTT GGTCAACGGT GTTAACCGAC ACCCATTATT TTTATGTGAA TGGCCGCTTA
GTGCGCGACC GTTTAGTCAA TCATGCGGTG CGCCAAGCAT TTGCCCAGAA AGCCGAGGTC
GAACAGCCGG GTTATGTGTT GATGCTGGAT ATCGATCCTC ATCAGGTGGA TGTGAACGTG
CATCCGGCGA AACACGAAGT GCGCTTTCAT CAGAGCCGTT ATGTGCATGA TTATATTCTG
CAGGCACTGC AATCGGCGCT CGAAGAAGCG GGTGAGCTGG GTTTTGAGCA TCCTTTCGAG
CCAAGTTCGC CACAGGTTAG GGATGAGGTC TCTCTCTCCG AATCTGGGAC GCAGACACAA
ACAGAGCATC ATGCCTTCGA GCTGCAATCG CCTGAATCTA AAACGCATTC AACTTGGAAT
GAAGCTTCAC GTGTTGATAC TTCTCGCGTC GAGATATCAC GGGATTCTCA GCTTACTGAG
CGTACTCGGG ACATTGCTAG CGCGCGTCCG TATTCTGGCG TGCAAAGCAA TGCCTACGGC
AGTATGGCGG TTCCGCGGGA GTCACGCAGT GGTCCGACAG GGGAAAGTCG TGCCCGAGCC
GAGCTTCCTT CTAAGGCGGC AATCGCCAGT TACGGCGAAT TATTGCAAAC GCCATCCTAT
AGCGTGCAGG ACAAGCCGTA TCAACCCGTG CTTGCAATGC CCGCCATGCT CAATGGTCAA
TATTGGGTAT TAGCGCAAGG GCAAAACCTG AGTCTGTTGC CGATTCAATC TGTGGCGTTA
GCGACTCGTA GCCATGAGAT AGAAACAAAG CTGGCAACCG GCTTGATAGG TCAGCCATTA
TTGATGCCAG TGTCGATTGC CGCCGATACG GATTGGCCAG CATTACTCGA AGAACATGAA
ACACTTATCC GGCAATTAGG ATTAGAACTA ACAATTCGCT ATCAGCAGTT GATAATCAAA
AAAGTGCCCC CATATCTCAG GGATAGCCAG TTAGCGAAGG TGATCCCCGA GTGGTTGCAA
TCGCTACGTT TTGAAGCGCC AGCACCTAAT GCATTGGCTG TGTGGCTGGC AGAGCAGAGT
TTAACTGGAT TTACCTCGGC TGCGGATATT TGGGCGGCCT ATAGTCAGTT AACTGAAGAG
AAAAGACAGC AAATTGCCGA TAAAGCAGTA TCCTTACCTT GGCAATCGTG GCTAGAAGAG
CAAGCAATTG AATAA
 
Protein sequence
MGIQILPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RIDIEIDKGG SKLIKIRDNG 
SGIPKDELAL ALSRHATSKL HSLDDLEAIL SFGFRGEALA SISSVSRLTL TSRTAEQTEA
WQAYAEGVDM AVKVMPAAHP VGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL
VRGDIHFTLT HNGKTVRNYR PAMNEPQYLQ RLTQVAGRQF ADEALRVECQ HDDLRLSGYL
QSPWSTVLTD THYFYVNGRL VRDRLVNHAV RQAFAQKAEV EQPGYVLMLD IDPHQVDVNV
HPAKHEVRFH QSRYVHDYIL QALQSALEEA GELGFEHPFE PSSPQVRDEV SLSESGTQTQ
TEHHAFELQS PESKTHSTWN EASRVDTSRV EISRDSQLTE RTRDIASARP YSGVQSNAYG
SMAVPRESRS GPTGESRARA ELPSKAAIAS YGELLQTPSY SVQDKPYQPV LAMPAMLNGQ
YWVLAQGQNL SLLPIQSVAL ATRSHEIETK LATGLIGQPL LMPVSIAADT DWPALLEEHE
TLIRQLGLEL TIRYQQLIIK KVPPYLRDSQ LAKVIPEWLQ SLRFEAPAPN ALAVWLAEQS
LTGFTSAADI WAAYSQLTEE KRQQIADKAV SLPWQSWLEE QAIE