| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0577 |
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| Symbol | |
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| ID | 4251140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 662671 |
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| End bp | 666381 |
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| Gene Length | 3711 bp |
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| Protein Length | 1236 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117136 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_732714 |
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| Protein GI | 113968921 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA GTGAGCCGGA TCTCCAATTA AAATCGCCGA TCCAAAAGAA CTATAACCGC
GCCGTTTTTT ATACCTATAT CGGCGTGATT GTCCTGTCGT TGCTGACGGC GTGGATGTTT
TTCGATCGCC AGAAAACCCA GCAGATGGAG CAGCGCGAAG AGCAGGTTGA GCGTCACGTA
TTGCAAATCG ACTTGCTGTT GGAGTCGAGC ATCCGCGCGG TCAAGAGTCT GCGGGATGTG
GCCGTAGATC ACCTGCGCTT AGGTGAGCTA GTGCGTAAGG ATCGTTTACC GCAATACGGC
AAATTTAACG AGAGTGGTCA GTATTTTACC TTAGAGCCTA ACTACGCAAA GGGCGGTAAA
CCTTTTACCA ACATGGGGCG GATCACGGGC GCAGGCTCCC TCGATGGCCG CAGCGATAAG
TTCTACCAAG AGCTGGAAAT GCTGTTCGAG TTGTCGCTGT CTTTCCCCGT CGCCAAAGAA
GCGGCACCTA AAGCCTCGGC GATTTATTAT TTATCGCGCC AACGGATGAT GTCCTACTTC
CCGTGGACCA ACGGTGACCA GCGTTTTAGG GATGAACTGC TCAATAAGAA ACAATTCCAA
TACGCCACCC CGGCGATGAA CCCGCAGCGC AGTGTGTTTT GGAGTGAGGC CTACGTCGAT
TCGACGGGTA AAGGCTTGCT GACCACCTTA GGTGTGCCCG TTTATCTCGA CGATGAGTTT
ATGGGTTCAA TTAACCTCGA TATGACCTTG GCCTCATTGG CGCGGCAAAT TCGGGTGTAC
TTCAAAATGC CTGGGACTGT GATCCTGCTC GATCAGCAGA ACAATATTTT GTCCCACAGC
GACTTCGATG GCTCAGATAT CAATCGGGTA TATCACATCA GCCAGCGGAT TCCGTCTGAG
CTGCATTCGC TCCCCGAGTC CGAATTGTTC GATGCCCACG AAGGCATTAT TCGCAACGGT
TACTATATTC ACTCGGTCGC GCTGCACAAC GCTCCGTGGC GCTTGTTGTA TCTGCAAAAT
GAAGACGACC TGTTCCAAGA TTCGGTTGAA AAACTGCAGC TGACCTTTAT CCTCGTTGTC
ATCGCTCTGT CGGTGCTGGT AACCATAGTG CACTGGCAAA CGCGCCGCTC CTTCGTGAGC
CCCGCATCGC GCCTGTTGTC ACACTTAGAG GGCTGTTCCC AAGAGCCGCG TAAACCGCCG
GAAAAAATCA CTCCGGGCTG GGAACCTTGG TTCCTGCTGG TGAGCCGCAT CTTTGAGGAA
AACAAGCAAT ACACCCATCA TTTGGCCGAG CAGAATAAGC GACTCGACAA ACTGGTCGCG
CGCCGTACCG AGCGGTTAAA AGATGCGACC GAACGGCGCG AGCGGGAATA TGCGTTGTTG
CGCTCCTTAC TCGACTCCAT TCCAGAAGCC ATTGTCTTTA AAGATAAAGA AGGCAATTAC
CTCGGCTGTA ACAAGGCCGC CGAGCGGATG CTGGGCTACA CCGAAAGCGA GATGATTGGT
CTGTCGTCGG AGGATTTAAC CTCGCCGGAG ATGGGCATTC GTATTCGTGC CGAGGATGAG
CAGATCTTAA AAGATCGCAC GCCGCTGCGT TATCAAGAAA AGGTTGAGTT AGCGGGCAAA
CCAGTGTTGC TCGATACCCT GAAACTGCCT TTCTATAACC GCCGTGGCGA GTTGCAAGGC
TTGATTGCCG TGTGGCGCGA TGTGACGCGT GAGTACGAGT CCGCCGAGCA GTTACGCCTG
TCAGAGGAGC GTTACCATTT AGCGATGGAC GCGGTAGAAG ACGGTCTGTG GGACTGGTAT
CTGGATTCGG AGCATATTAT TTGCAACCCA TCCTATTATT CGATGCTGGG CTATAAACCC
AATGAATTCC CAGCGTTAGT GTCGGCTATC GACCAGCTGA CGCATCCCGA CGATAGAATT
CGGGTCGAAG AATATCGTAA TCAGTATCTG CAAAATCCCG TCGATGCCTA TGAGATCGAG
TTTAGGATCT TAGGCAAAAA CGGCAGTTAT CACTGGGTGC TTTCCCGCGG CCGGGTGGTG
GAATTTACCG CCGATGGTCA GCCTAAGCGT ATGGTCGGTA CCCACAAGGA CATCACGCGC
CATAAGAGTA ACGAAGTGGC ACTGCTGGAG GCGAAGCAGG ACGCAGAACT GGCGAACCTC
TATAAGAGTG AGTTCTTGGC GAATATGAGC CACGAAATCC GCACGCCAAT GAACGCCATT
ATCGGTATGT TGCAGTTAGC GCAGCGTACC TCGCTGACGG CGCAGCAGAA GGATTACCTC
GAAAAAGCCG GGTTCTCGGC GCAGTCGTTG CTGCGGATTA TTAACGATAT TCTCGACTTC
TCTAAGATTG AAGCGGGTAA ATTAGAGCTG GAGCGGGTGC CGTTCCCGCT GGATAAAGTG
CTCGACCATG CCCTCGATCT CAATGCGCTT AAGGCGCAGG AGCAAGGCGT CGAGTTATTA
CTGTATGCGC CAGTCACGGC AGGCCTCATT CTTAAGGGCG ACCCGCTGCG TCTAGGCCAA
GTGCTGATCA ACCTGTTATC GAACGCGGTG AAGTTTACCC AATCCGGTGA GATTGAACTG
GGCTGCGAAG ATGTGGGCGA GCGCGACCAT CGGATTACCT TAAAATTCTG GGTACGGGAT
ACGGGGATTG GGATCAGTAA AGATCAGCAG GAAAAACTGT TCGATGCCTT TGCCCAGGCC
GATGGCTCGA CGACCCGTAA GTACGGTGGC ACGGGATTAG GTTTATCGAT CAGTAAGCAT
TTGGTCTCCA TGATGGGCGG CAAGATGCAG GTGCAGAGTG AGTTAGGCGT CGGCAGTACC
TTCAGCTTTA CCATCAGCTT TGAGATTGCC GAAGAGGCCA AGGTTGAGCC CTTAGTGGTG
CCTGAAAAAC TCAATAATTT ACGCACACTT GTGGTGGATG ATAACCCGAC GGCGCTGCAA
ATTTATTCGG CATTGATGCG CGATTTCCAC TTCGAGGTGG ATACGGCCGC CAGCGGCGCC
GAGGCGCTGT ATAAGTTGTC GCGGGATCCT ATCGATTTAT TGTTGCTTGA CTGGATGATG
CCTGAGATGG ATGGTGGCGA TGTGATCAGT GCCATCGATA CCATGGTGGC CGAAGGCCGC
ATCGCAAAAC GGCCCATTAT CATCATGATG ACCGCCTATG CGGCAGAACC TTTACAGCAC
GAAGTCGACA GTGCCAATGT GTTTGCCGTG TTGCAAAAAC CCTTTAAGGC ATCGAGTCTG
TTCGATGAGA TCATCGCCGC CTTTGCCGAT GAGCCAAGGC TTAATGTGGT GCAGCCTATT
GATGAAGTGC CGGTAGAAGA GGGTGAACAT ACAGGGCTTG TGCTCTTGGT GGAAGATAAC
TTTATCAACC AACAGGTGGC GACTGAGCTA CTAAAGAGCG CAGGATACGA AGTCGTTGTT
GCAGGAAATG GCCAAATTGC CCTCGATATT ATCGACTCAC GCCCCTTCGA TGCGGTATTA
ATGGATATTC AAATGCCAGT GATGGACGGG TTAACCGCGG CGCGGGCACT GCGTGAACGC
TTTAGTGCCG ACGTGCTGCC TATTATCGCC ATGACGGCCC ATGCGATGTC GGGCGATCGA
GAAAAGAGTC TTGCGGCAGG GATGAATGCC CATATCACTA AGCCGATAGT GTTAACTGAA
CTGTTTGAAA CCTTATCGCA TTGGATAAAA CACAAGAATA ATCATCATTA A
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| Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VLSLLTAWMF FDRQKTQQME QREEQVERHV
LQIDLLLESS IRAVKSLRDV AVDHLRLGEL VRKDRLPQYG KFNESGQYFT LEPNYAKGGK
PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSRQRMMSYF
PWTNGDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF
MGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDGSDINRV YHISQRIPSE
LHSLPESELF DAHEGIIRNG YYIHSVALHN APWRLLYLQN EDDLFQDSVE KLQLTFILVV
IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITPGWEPW FLLVSRIFEE
NKQYTHHLAE QNKRLDKLVA RRTERLKDAT ERREREYALL RSLLDSIPEA IVFKDKEGNY
LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QILKDRTPLR YQEKVELAGK
PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY
LDSEHIICNP SYYSMLGYKP NEFPALVSAI DQLTHPDDRI RVEEYRNQYL QNPVDAYEIE
FRILGKNGSY HWVLSRGRVV EFTADGQPKR MVGTHKDITR HKSNEVALLE AKQDAELANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF
SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKDQQ EKLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EEAKVEPLVV
PEKLNNLRTL VVDDNPTALQ IYSALMRDFH FEVDTAASGA EALYKLSRDP IDLLLLDWMM
PEMDGGDVIS AIDTMVAEGR IAKRPIIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL
FDEIIAAFAD EPRLNVVQPI DEVPVEEGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVV
AGNGQIALDI IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADVLPIIA MTAHAMSGDR
EKSLAAGMNA HITKPIVLTE LFETLSHWIK HKNNHH
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