Gene Shewmr4_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0568 
Symbol 
ID4251131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp650847 
End bp651614 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID638117127 
ProductABC-3 protein 
Protein accessionYP_732705 
Protein GI113968912 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATC TGGAACTGAT GTCGATCCTG CTGCCAGCAT TGACGGCGGG GATCTTAGTG 
CTCTCAACGC ATATTGTACT TGGCAAACAA GTGCTTAAGC GTGGGATCAT CTTTATCGAT
TTAGCCATTG CTCAAGTCGC CGCGTTGGGG GCGATTGTGG CGCACATGGA CCACAGGTTA
GAAGATATGC CATTTTCTAA TGTGTGGATG CCGGCCTTAT TCGCCCTTGC GGGGGCGGGT
TTTATCGCTT GGTTATCTAA GCGGATGGCG GGTGAGCTAG AAGCGATGAT AGGGTGCTTT
TACGTGTTGT CGGCGGTGGC GGCCATGCTA TTGCTGGCGA ACGATCCCCA CGGGGCTGAA
CTGTTAAAGC AATTGATGTC GGGCCAGATC CTTTGGGTGA GTTGGTCGCA ATTAGTGTTG
CCGACCGTGG TTTATGCGGC GGTGTTAGCG GTGATTTTTC TGCGGCCACA GATCTTAAAC
GGTGCGGGAT TCTATCTGCT GTTTGCGCTG GTAATCACTT TGTCGGTAGA GCTGGTAGGG
GTCTATTTAG TGTTTAGCAC GCTTATTTTG CCTGCTCTTG CGCTCAACAA GTACCAAGGT
AAGAACGGCC TATTTTACGC TTATCTGGTC GGCCTTATGG GTTACTTGCT GGGGCTGGTG
CTCTCGGCAA CGTTGGACTT ACCGAGCGGC GCGGCAATTG TCGCGACTTT AGCCCTTAGT
GCCTTGGTCT TCCGTTTAGG CTTAAGTAAA ACCGCGGCAG TGCGCTAG
 
Protein sequence
MLDLELMSIL LPALTAGILV LSTHIVLGKQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL 
EDMPFSNVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE
LLKQLMSGQI LWVSWSQLVL PTVVYAAVLA VIFLRPQILN GAGFYLLFAL VITLSVELVG
VYLVFSTLIL PALALNKYQG KNGLFYAYLV GLMGYLLGLV LSATLDLPSG AAIVATLALS
ALVFRLGLSK TAAVR