Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0568 |
Symbol | |
ID | 4251131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 650847 |
End bp | 651614 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117127 |
Product | ABC-3 protein |
Protein accession | YP_732705 |
Protein GI | 113968912 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGATC TGGAACTGAT GTCGATCCTG CTGCCAGCAT TGACGGCGGG GATCTTAGTG CTCTCAACGC ATATTGTACT TGGCAAACAA GTGCTTAAGC GTGGGATCAT CTTTATCGAT TTAGCCATTG CTCAAGTCGC CGCGTTGGGG GCGATTGTGG CGCACATGGA CCACAGGTTA GAAGATATGC CATTTTCTAA TGTGTGGATG CCGGCCTTAT TCGCCCTTGC GGGGGCGGGT TTTATCGCTT GGTTATCTAA GCGGATGGCG GGTGAGCTAG AAGCGATGAT AGGGTGCTTT TACGTGTTGT CGGCGGTGGC GGCCATGCTA TTGCTGGCGA ACGATCCCCA CGGGGCTGAA CTGTTAAAGC AATTGATGTC GGGCCAGATC CTTTGGGTGA GTTGGTCGCA ATTAGTGTTG CCGACCGTGG TTTATGCGGC GGTGTTAGCG GTGATTTTTC TGCGGCCACA GATCTTAAAC GGTGCGGGAT TCTATCTGCT GTTTGCGCTG GTAATCACTT TGTCGGTAGA GCTGGTAGGG GTCTATTTAG TGTTTAGCAC GCTTATTTTG CCTGCTCTTG CGCTCAACAA GTACCAAGGT AAGAACGGCC TATTTTACGC TTATCTGGTC GGCCTTATGG GTTACTTGCT GGGGCTGGTG CTCTCGGCAA CGTTGGACTT ACCGAGCGGC GCGGCAATTG TCGCGACTTT AGCCCTTAGT GCCTTGGTCT TCCGTTTAGG CTTAAGTAAA ACCGCGGCAG TGCGCTAG
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Protein sequence | MLDLELMSIL LPALTAGILV LSTHIVLGKQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL EDMPFSNVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE LLKQLMSGQI LWVSWSQLVL PTVVYAAVLA VIFLRPQILN GAGFYLLFAL VITLSVELVG VYLVFSTLIL PALALNKYQG KNGLFYAYLV GLMGYLLGLV LSATLDLPSG AAIVATLALS ALVFRLGLSK TAAVR
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