Gene Shewmr4_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0559 
Symbol 
ID4251787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp641888 
End bp642751 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content50% 
IMG OID638117118 
Productdehydratase 
Protein accessionYP_732696 
Protein GI113968903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAATG CATATTGTGT TGAATTGAAC GCGATGCCCT CGCTGTTTTC TCTTTATCGC 
AAGATTTTCT TTGGCCGTAA ACCTGGTTGG GATCAACAGC CGCTGCCTTA TATCAAGGTG
TCGGCGCCCA ATGTGCAAGT GTCCGAGGCC AAAGTTAGCC AATATGCCCA AGTGTGTGGC
TTTAATTTCG ACGGTAAATT ATTACCGCCA ACCTATTTGT ATGTGATGGC ATTTCGTCTG
CACGCGGTGA TTTTTACCCA CGATGGTATT ACCTTCCCGC TGCTGGGGAT GATCCATTTA
AAGAACCGTA TTCAAGTCTA TCGTCCGACG ACAGTCGATG AAGTGTTCTC CCTCGAATGC
GCGTTAACCA CCAGCCGTGA AACCGATTCA GGCTTAGAGT TTGAATTTGT CTCTAAGGCC
TTTGTGGGCG AAGAGCTGGT GTGGGAATCG CTGTCGACTT ACCTCTATCG TATCGAGACC
GCGGGTCGTC GCGTTCGTCC TCCTAAGGCG CTTGAGATGG CTTGGGATTC ACCCCAATCA
TGGGAATTGA GTGAAGATTT AGGTCGTCGT TATGCCAAAG CATCAGGCGA CTATAACCTG
ATCCACCTGC ATCCTGTGCT GTCCAAACGT TTCGGTTTTG ACCGTGTGCT GGCCCACGGT
ATGTGGTCTA AGGCGCGCTG CTTAGCGGAA TTAATGCCTG AGATTGGTGA ACGCCCCTTT
GTGGTCGATG TGGCCTTTAA GCTGCCGTTA CTGATGCCCG CAGAAGTGGG ATTTGGTTAC
GAAACATCAC AAGACAAGTG GGTGTTCGAG CTACGTGACA GTAAAGGTCG CAGGCCACAT
CTCAGTGGTG AAGTGCAGCT TTAA
 
Protein sequence
MNNAYCVELN AMPSLFSLYR KIFFGRKPGW DQQPLPYIKV SAPNVQVSEA KVSQYAQVCG 
FNFDGKLLPP TYLYVMAFRL HAVIFTHDGI TFPLLGMIHL KNRIQVYRPT TVDEVFSLEC
ALTTSRETDS GLEFEFVSKA FVGEELVWES LSTYLYRIET AGRRVRPPKA LEMAWDSPQS
WELSEDLGRR YAKASGDYNL IHLHPVLSKR FGFDRVLAHG MWSKARCLAE LMPEIGERPF
VVDVAFKLPL LMPAEVGFGY ETSQDKWVFE LRDSKGRRPH LSGEVQL