Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0559 |
Symbol | |
ID | 4251787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 641888 |
End bp | 642751 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117118 |
Product | dehydratase |
Protein accession | YP_732696 |
Protein GI | 113968903 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATAATG CATATTGTGT TGAATTGAAC GCGATGCCCT CGCTGTTTTC TCTTTATCGC AAGATTTTCT TTGGCCGTAA ACCTGGTTGG GATCAACAGC CGCTGCCTTA TATCAAGGTG TCGGCGCCCA ATGTGCAAGT GTCCGAGGCC AAAGTTAGCC AATATGCCCA AGTGTGTGGC TTTAATTTCG ACGGTAAATT ATTACCGCCA ACCTATTTGT ATGTGATGGC ATTTCGTCTG CACGCGGTGA TTTTTACCCA CGATGGTATT ACCTTCCCGC TGCTGGGGAT GATCCATTTA AAGAACCGTA TTCAAGTCTA TCGTCCGACG ACAGTCGATG AAGTGTTCTC CCTCGAATGC GCGTTAACCA CCAGCCGTGA AACCGATTCA GGCTTAGAGT TTGAATTTGT CTCTAAGGCC TTTGTGGGCG AAGAGCTGGT GTGGGAATCG CTGTCGACTT ACCTCTATCG TATCGAGACC GCGGGTCGTC GCGTTCGTCC TCCTAAGGCG CTTGAGATGG CTTGGGATTC ACCCCAATCA TGGGAATTGA GTGAAGATTT AGGTCGTCGT TATGCCAAAG CATCAGGCGA CTATAACCTG ATCCACCTGC ATCCTGTGCT GTCCAAACGT TTCGGTTTTG ACCGTGTGCT GGCCCACGGT ATGTGGTCTA AGGCGCGCTG CTTAGCGGAA TTAATGCCTG AGATTGGTGA ACGCCCCTTT GTGGTCGATG TGGCCTTTAA GCTGCCGTTA CTGATGCCCG CAGAAGTGGG ATTTGGTTAC GAAACATCAC AAGACAAGTG GGTGTTCGAG CTACGTGACA GTAAAGGTCG CAGGCCACAT CTCAGTGGTG AAGTGCAGCT TTAA
|
Protein sequence | MNNAYCVELN AMPSLFSLYR KIFFGRKPGW DQQPLPYIKV SAPNVQVSEA KVSQYAQVCG FNFDGKLLPP TYLYVMAFRL HAVIFTHDGI TFPLLGMIHL KNRIQVYRPT TVDEVFSLEC ALTTSRETDS GLEFEFVSKA FVGEELVWES LSTYLYRIET AGRRVRPPKA LEMAWDSPQS WELSEDLGRR YAKASGDYNL IHLHPVLSKR FGFDRVLAHG MWSKARCLAE LMPEIGERPF VVDVAFKLPL LMPAEVGFGY ETSQDKWVFE LRDSKGRRPH LSGEVQL
|
| |