| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0558 |
|---|
| Symbol | |
|---|
| ID | 4251786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 640737 |
|---|
| End bp | 641525 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638117117 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_732695 |
|---|
| Protein GI | 113968902 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGATA AGAATTTCGA TAAACTCGCG CAAAAGTTCG CGAAGAACAT TTATGGCACC
CCTAAAGGTG AAATCCGTGC CGCCGTGTTA TGGCGCGATC TTGCTCCCGC CTTGGCGCAA
TTGGGCGATA AAAAACTGCG GATTTTAGAT GCGGGCGGCG GCTTTGGTTA TTTCAGCCAA
AAGCTGGCAC GTCTGGGCCA TGAAGTGGTG TTGTGCGATA TTTCCGCCGA AATGCTCGCC
CAAGCGAAAG CACAAATCGA TGCCAGCGAC ACGCCATTGG CAATCCGTTT GGTTCACGCA
CCGATTCAAG ATCTCTCAGT CGCCGAACAT GGCAAGTTCG ATCTTATCCT CTGCCATGCC
GTAGTCGAAT GGCTGGCCGA TGCGAAAACC ACCATGGAAG GTTTGCTGAC CATGCTTAAG
CCCAATGGGC TGTTTTCGCT GATGTTTTAC AATAAAGAAG CGATGCGCTT CCATGCGTTA
GTGTCGGGTA ATTTCGACTA TGTTGCCGCC GATCTTAAGG TGAAGAAGAA GGTGCGCCTC
ACGCCCACGC ACCCGCTTTA TATTCATGAT GTTAAACAAT GGTTTGCCGA ATGGCACATG
ACCCTGCTGC GCGAATCAGG CGTGCGAGTC ATTCACGACT ATTTGAAAAA ACACCAGCCT
GCGGATTTTG ACTATCAAAA GCTGCTGACG ATGGAGCTCG AATATTCCCA ACGTGAGCCC
TATATTTCGC TCGGTCGTTA TGTGCATTTT CTGGGGCAAA GCGCCGCAGC GCCCCAAGCA
CCCGAGTAA
|
|---|
| Protein sequence | MQDKNFDKLA QKFAKNIYGT PKGEIRAAVL WRDLAPALAQ LGDKKLRILD AGGGFGYFSQ
KLARLGHEVV LCDISAEMLA QAKAQIDASD TPLAIRLVHA PIQDLSVAEH GKFDLILCHA
VVEWLADAKT TMEGLLTMLK PNGLFSLMFY NKEAMRFHAL VSGNFDYVAA DLKVKKKVRL
TPTHPLYIHD VKQWFAEWHM TLLRESGVRV IHDYLKKHQP ADFDYQKLLT MELEYSQREP
YISLGRYVHF LGQSAAAPQA PE
|
|---|
| |