Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0547 |
Symbol | |
ID | 4251775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 632577 |
End bp | 633269 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117106 |
Product | hypothetical protein |
Protein accession | YP_732684 |
Protein GI | 113968891 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAT CACTGTACAG CGTTTTGGCA TTATCGACGG GATTGTTATT AACGACCAAC GCCTTTGCGG CGGTGTCCGG CAATATTGGC GGCACCTCAA ACTATCTATG GCGCGGGGTA ACTCAAACCA ACGATGCGGT CGCTATCCAA GGAGGCATTG ACTATAGCCA TGACTCCGGA TTCTATGCCG GCACTTGGGC CTCAAATGTC GACTTTGGCG ACGATACCAG CTATGAGTTG GATCTCTACG CAGGCTACGG CGGCAACATC ACCGAAGACC TCAGCTACGA TATTGGCTAC CTCTACTACG CTTACCCCGA TGCCGAAGGC AGCATCGATT TTGGTGAACT GCACGGTGCC ATCACCTGGA AATGGTTTGA ACTCAGTTAT TCCCACGTGA TCAACGCCGG TGATGATGTC GCGGCCGAGC CATTAGATAA CAAAGATATG AGTTATCTTG CGGCCACTGC GTCTTTCCCA CTGACGGATA AGCTGAGCCT GTCATTGCAC TACGGTTATT CCAGCGGCGA TGTAGTCGAA TCTTGGTTCG ATGAGGATAA CTACGCAGAT TACAACGTCA CACTCAGTGC CGATACCAGC ATGGGCACAG TCTCATTTAT GGTGTCGGAT ACCGATCTGC AGGGTGATGA TGCCAAGGTT GTTTTAGGCT ATTCCTACAG CTTTGATTTA TAA
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Protein sequence | MRKSLYSVLA LSTGLLLTTN AFAAVSGNIG GTSNYLWRGV TQTNDAVAIQ GGIDYSHDSG FYAGTWASNV DFGDDTSYEL DLYAGYGGNI TEDLSYDIGY LYYAYPDAEG SIDFGELHGA ITWKWFELSY SHVINAGDDV AAEPLDNKDM SYLAATASFP LTDKLSLSLH YGYSSGDVVE SWFDEDNYAD YNVTLSADTS MGTVSFMVSD TDLQGDDAKV VLGYSYSFDL
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