Gene Shewmr4_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0547 
Symbol 
ID4251775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp632577 
End bp633269 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID638117106 
Producthypothetical protein 
Protein accessionYP_732684 
Protein GI113968891 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAT CACTGTACAG CGTTTTGGCA TTATCGACGG GATTGTTATT AACGACCAAC 
GCCTTTGCGG CGGTGTCCGG CAATATTGGC GGCACCTCAA ACTATCTATG GCGCGGGGTA
ACTCAAACCA ACGATGCGGT CGCTATCCAA GGAGGCATTG ACTATAGCCA TGACTCCGGA
TTCTATGCCG GCACTTGGGC CTCAAATGTC GACTTTGGCG ACGATACCAG CTATGAGTTG
GATCTCTACG CAGGCTACGG CGGCAACATC ACCGAAGACC TCAGCTACGA TATTGGCTAC
CTCTACTACG CTTACCCCGA TGCCGAAGGC AGCATCGATT TTGGTGAACT GCACGGTGCC
ATCACCTGGA AATGGTTTGA ACTCAGTTAT TCCCACGTGA TCAACGCCGG TGATGATGTC
GCGGCCGAGC CATTAGATAA CAAAGATATG AGTTATCTTG CGGCCACTGC GTCTTTCCCA
CTGACGGATA AGCTGAGCCT GTCATTGCAC TACGGTTATT CCAGCGGCGA TGTAGTCGAA
TCTTGGTTCG ATGAGGATAA CTACGCAGAT TACAACGTCA CACTCAGTGC CGATACCAGC
ATGGGCACAG TCTCATTTAT GGTGTCGGAT ACCGATCTGC AGGGTGATGA TGCCAAGGTT
GTTTTAGGCT ATTCCTACAG CTTTGATTTA TAA
 
Protein sequence
MRKSLYSVLA LSTGLLLTTN AFAAVSGNIG GTSNYLWRGV TQTNDAVAIQ GGIDYSHDSG 
FYAGTWASNV DFGDDTSYEL DLYAGYGGNI TEDLSYDIGY LYYAYPDAEG SIDFGELHGA
ITWKWFELSY SHVINAGDDV AAEPLDNKDM SYLAATASFP LTDKLSLSLH YGYSSGDVVE
SWFDEDNYAD YNVTLSADTS MGTVSFMVSD TDLQGDDAKV VLGYSYSFDL