| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0539 |
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| Symbol | |
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| ID | 4250893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 622464 |
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| End bp | 623906 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117098 |
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| Product | RNA-metabolizing metallo-beta-lactamase |
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| Protein accession | YP_732676 |
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| Protein GI | 113968883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CATTGCAGTT TTTGGGGGCG ACCGAGGAAG TCACTGGGTC GTGCCATTTA
CTCACAATTG CTGGGCAGCA GATGCTCCTC GATTGCGGCC TCATCCAAGG CGGTAAGGCT
GACGAGTTAC GCAATCACGA ACGATTTTCC TTTGACCCCC AAGCCATTTC AGCCGTTGTC
TTGAGTCATG CCCATATTGA TCATTCGGGA CGTTTACCCC TGTTGGTCAA GGCTGGCTAT
ACGGGGCCGA TTTATACCCA CAAAGCGACT GCCGAGCTGT GTGCCATCAT GCTAAAAGAT
GCTGCCATGT TGCAGGTGCG GGATACCGAA AGAAACAATA AAAAACGTGC TAAGCATGAG
TTAGAACCCT TAGAGCCGCT ATTTACCGTG GAAGATGCGG AGCAGGCCGT CACCCAATTT
GTGGCGCTAG AATATGGTCA AGTGACGCAG GTTATTCCCC ATGTGGATAT CTGCTTATCC
GATGCGGGGC ATATTTTAGG CTCGGCACTG GTTGAGCTGT GGTTGGGCGA AGGCAAGGCA
CAGAAAAAAC TGGTATTTAG TGGCGATCTT GGCCGAGCGG GTATGCCCAT CTTACGTAAT
CCTACCTTAG TCGACACCGC CGATTTAGTG TTAATGGAAA GCACCTACGG CGATCGTTTC
CACCGTAGTT GGACTGATAC TCTGGCCGAA TTAAAGGCAA TTTTTGCCAA GGCAGTGACC
GAGAGCCGCG GTAATATTCT CTTGCCAGCC TTTTCTGTGG GGCGAGCGCA GGAGCTTTTA
TATCTATTTC ATTTATATGC TAAAGATTGG GACTTATCTC GCTGGAAAGT CTGCCTCGAT
AGTCCAATGG CGATTGAGGC GACACGGGTG TATGTTAATA ACTACCCCTT AATGGATGAT
GATTTTAAGC GTTTTACTCG CCAGCATCCG GGGCAGCATC CCTTACTATC GAATGTCGAA
TTTATTCAAA CCACCGAAGA GTCTATCGCG CTAAACGATG TGCATCAGGG CTTGATCATT
ATTGCGGGTA GTGGCATGTG TAACGGTGGC CGGATCCGTA GCCATTTGGA GCATAATCTG
TGGCGGCCAG AATGTGATGT GATTATCTGT GGTTATCAAG CACTTGGCAC GCCTGGACGC
GCCTTGGTCG ATGGCGCCGA GGAACTCACT ATTCATGGTA ATAGCATCAA AGTTGCCGCC
ACATTGCATA CGGTCGGTGG CTTATCTGCC CATGCGGATC AGGCCGAGTT GCTACGCTGG
TATCGGCATT TTGAAGATCA GCCACCCTTG GTACTGGTGC ATGGCGAGCC TGGAGCGCAG
CAGGGATTAG TCGCAGTGAT GAATCAAGAT CCAAAAACTA AACCTAAGGC GCTTGCTATT
GCCACCCGTG GAGATATGTT GGATTTGAAC GCCTTACCAA AATTAGTCTG GGTGACAGCT
TAA
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| Protein sequence | MQMTLQFLGA TEEVTGSCHL LTIAGQQMLL DCGLIQGGKA DELRNHERFS FDPQAISAVV
LSHAHIDHSG RLPLLVKAGY TGPIYTHKAT AELCAIMLKD AAMLQVRDTE RNNKKRAKHE
LEPLEPLFTV EDAEQAVTQF VALEYGQVTQ VIPHVDICLS DAGHILGSAL VELWLGEGKA
QKKLVFSGDL GRAGMPILRN PTLVDTADLV LMESTYGDRF HRSWTDTLAE LKAIFAKAVT
ESRGNILLPA FSVGRAQELL YLFHLYAKDW DLSRWKVCLD SPMAIEATRV YVNNYPLMDD
DFKRFTRQHP GQHPLLSNVE FIQTTEESIA LNDVHQGLII IAGSGMCNGG RIRSHLEHNL
WRPECDVIIC GYQALGTPGR ALVDGAEELT IHGNSIKVAA TLHTVGGLSA HADQAELLRW
YRHFEDQPPL VLVHGEPGAQ QGLVAVMNQD PKTKPKALAI ATRGDMLDLN ALPKLVWVTA
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