| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0534 |
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| Symbol | |
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| ID | 4250888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 617760 |
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| End bp | 618755 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117093 |
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| Product | permease |
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| Protein accession | YP_732671 |
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| Protein GI | 113968878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAAA TATTTACTGA TTTGGCGACT TGGCTAGTGT ACGGCGTGTT TGGCTTAGAG
GCGGGTTCGG CCTTGGGCGG CGCTGTGCAT TTTTTTGTTG AAGATGTCAG TAAAATTTTT
ATATTGCTGG TGGTGATGAT TTATCTCATC GCCTTGCTGC GGGCGTCCTT AGATGTTGAG
CGAGTCCGTG ACTATTTAAC GGGCAAGAAT AAAGGCGTGG GATATTTTCT GGGGTCGATA
TTTGGTGCCA TCACACCTTT TTGCTCATGC TCGAGCATCC CAGTCTTTTT AGGCTTTACT
TCGGCTGGGA TCCCCCTTGG GATCACTATG GCCTTCCTGA TCACTTCTCC TTTGATCAAC
GAGGTCGCCG TCCTGCTGCT GATGAGTTTA CTCGGCTGGA AATTTACCTT GCTATATGTG
GCTGTGGGGA TGACAGTAGG TATGCTCGGC GGACTATTGC TCGATGCGAT TAAGGCCGAG
CGTTGGTTAC AATCCTTCGC CGCCGAAGCC CTAGTTCGTG GACGCCAAAT GGCGGCGTCG
AATGCTGTTC CTACGACTCA GCGGGTCCTA TCTTTTACCG AGCGGCATCA ATTTGCGAAA
GCTGAGGCGC TTGAGATTTT TGGCCGTGTT TGGAAGTGGG TCATTATCGG TGTGGGTCTT
GGCGCTGCCT TACACGGTTT TGTACCAGAG GGATGGGTTG AAACCCATTT AGGTCAAGGT
CAATGGTGGT CTGTGCCTGC GGCCGTGTTA GTCGGTATTC CTCTGTATTC GAACGCGACT
GGCATTATTC CTGTGATGGA GAGTTTACTG GCGAACGGCT TGCCTATTGG TACTACGCTG
GCTTTCTGTA TGAGTACAGT GGCGGCCAGT TTTCCCGAAT TTATTTTACT CAAACAAGTC
ATGCAGTGGC GCCTGTTGGC GGTGCTGTTG GTTGTGCTAT TGACGGCATT TACGTTAGTA
GGTTGGATTT TTAATTTTGC AGCACCGTAT CTTTAA
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| Protein sequence | MFQIFTDLAT WLVYGVFGLE AGSALGGAVH FFVEDVSKIF ILLVVMIYLI ALLRASLDVE
RVRDYLTGKN KGVGYFLGSI FGAITPFCSC SSIPVFLGFT SAGIPLGITM AFLITSPLIN
EVAVLLLMSL LGWKFTLLYV AVGMTVGMLG GLLLDAIKAE RWLQSFAAEA LVRGRQMAAS
NAVPTTQRVL SFTERHQFAK AEALEIFGRV WKWVIIGVGL GAALHGFVPE GWVETHLGQG
QWWSVPAAVL VGIPLYSNAT GIIPVMESLL ANGLPIGTTL AFCMSTVAAS FPEFILLKQV
MQWRLLAVLL VVLLTAFTLV GWIFNFAAPY L
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