| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0531 |
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| Symbol | |
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| ID | 4250885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 613891 |
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| End bp | 615999 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117090 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_732668 |
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| Protein GI | 113968875 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTA AAGACATTTT TCGTGTATCC CTTATTCAAA TCGCCATCTT AAGCGTGTTT
ACTCAAACAG TTTATGCCGA AGAGTCCACG CCCAATATCG AACACCTCGA AGTCAAAGGT
ATTCGCCAAC CATTTCGAGG GGATGTGCCA CTGAAAGCTC AGCCACAGGC GGTAGAAAGC
CTGTCGATGG AGCAAATTAG CGATGCGGGT ATATCGACGC TGATGGATGC ACTGGATTTA
TCGAGCTCAG TCAATCGCCA AAATAATTTT GGTGGTATGT GGGACAGTTT CGCCGTGCGC
GGCTTTGTGG GCGATGAAAA CGTCCCCTCG GGTTATCTAG TTAATGGTTA TGATGCGGGA
CGTGGTTTTG GTGGTACCCG TGATACTGCG AACGTAGAAA GTATCGAGAT AATGAAAGGC
CCAGGTTCTG CTCTTTATGG CCGCGCAGAA CCCGGCGGCA CCATTAACAT CATCACCAAA
AAACCTAAAT TCTTCCAAGA AGGCTATCTG CAAGCCAGTG CCGGTCGCTG GGATAATTAC
CGTCTTGAGG GGGATTATAC TAACGCCATT ACCGACGATT TAGCCTTTAG GGTTAACGGT
GCGATTGAAG ACAAGGGCAG TTTCCGCAAT CCCGTTAATT CGGAAAAAAG GATTTTAACC
CCTTCTTTGC TTTGGGTAGC TAGTGATACC ACGCGTCTAA GCTATGAACT GGAATATACA
AACCAAAAAG TCCCCTTCGA CCGTGGCATT GTGGCTATCG ACGGCGACAT TAAAGCCTTA
CCCATTGATA GATATCTAGG TGAGGCCAGT GATGGCGCGA CCCAAATTGG TCTATTAGCC
CACCAATTTA CCTTAGAACA TGACTTTGGT AACTGGAGTT TATTATCGGG TATTAGCTAC
CGCGACACAG GACTTGAAGG CTACGCAAGC GATCCAGAGT TGGTGAAAAG TCGTCAAATG
CTCAACATCG ACGGTGAAAC CCTAAGCCGT CAACATAACT ACCGTAACTT CACCTCAACT
GACTTATCGG GTCGCGTTGA GTTAAGCGGC AAGGTCGAGA CCGGTGATAT TAGCCACCAC
CTTCTCATTG GCGCAGACGG TTATCACTTC CATTTCGACA AATATTGGGA ACGCTTCCGC
CCTGCAGCTG GCGATACGAC TTACAGCATC AATGTTTACA ATCCAGTGTA TGGACAAATT
GCGCCCGAAG GCGCCCTGCT CTACAACCAG GTAGAGACTC AGGATAACTA CGGGATCTAT
TTGCAAGACC AACTCGATCT CAGCGAAAAA TGGAAGCTCA CCTTAGGTGG CCGCTTTGAC
AGTTTCGAGC AAAGCATTGA AAACCATAAA AATCAGACAG AATCCAATCA AACCCAAAAT
GTCTTTAGTC CAAGAGCCGG TATCGTTTAC GAATGGCAAC CTTGGTTAAG CCTCTATGGC
AGTTACTCTG AAGGTTTTCG CCCTAACACA GGTTCTGATT ATCGCGGTGT CGCATTCGAA
CCCGAAGAGA GTAAATCCTA TGAGCTAGGT ACTAAGTTTG AGTTAGAAAA TCTGACAGGC
TCTATCGCCC TCTTCCGCGC CGAAAAGAGT AATGTGCTAA CTGCAGACCC TGTGAATTCA
GGTTTTTCAG CGGCACTAGG TAAAGCCGAT AGCCAAGGGA TTGAGCTGGA TTTGGCAGCC
TACCTAACGG CCGATACTCA GCTGTTGCTA TCCTACGCCT ATACCGATGC CAAGACGGCT
AACGATATTC TCAACGCAGA TTGGGGCGTG AGCATTCCCG AAGGCAGTCG TTTAATCAAC
ATCCCAAAAC ACAATGGTCA TCTCACGCTA AAACATGATA CTTCATTGTT TGGTTCCGAT
GCCTCCGCGG GAGCGACATT GCTTTATGTG GGCGATCGCT TAGGTGAAAC CATTGATCCA
AACTACATAC TGCCAGCATA TACCTTAGTG AATCTATTTA GCACCTACGC GTTAAATCAG
GATCTTAGCC TGCAATTTAA TATCACTAAC CTGTTCGACG AAGTTTACTA TCAAAGCTCT
TATTCATCGA TGTGGACTAT GCCTGGCGAG CCACGCAGCT ACAAAGTCAG CGTGCGTTAT
AATTTCTAA
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| Protein sequence | MSTKDIFRVS LIQIAILSVF TQTVYAEEST PNIEHLEVKG IRQPFRGDVP LKAQPQAVES
LSMEQISDAG ISTLMDALDL SSSVNRQNNF GGMWDSFAVR GFVGDENVPS GYLVNGYDAG
RGFGGTRDTA NVESIEIMKG PGSALYGRAE PGGTINIITK KPKFFQEGYL QASAGRWDNY
RLEGDYTNAI TDDLAFRVNG AIEDKGSFRN PVNSEKRILT PSLLWVASDT TRLSYELEYT
NQKVPFDRGI VAIDGDIKAL PIDRYLGEAS DGATQIGLLA HQFTLEHDFG NWSLLSGISY
RDTGLEGYAS DPELVKSRQM LNIDGETLSR QHNYRNFTST DLSGRVELSG KVETGDISHH
LLIGADGYHF HFDKYWERFR PAAGDTTYSI NVYNPVYGQI APEGALLYNQ VETQDNYGIY
LQDQLDLSEK WKLTLGGRFD SFEQSIENHK NQTESNQTQN VFSPRAGIVY EWQPWLSLYG
SYSEGFRPNT GSDYRGVAFE PEESKSYELG TKFELENLTG SIALFRAEKS NVLTADPVNS
GFSAALGKAD SQGIELDLAA YLTADTQLLL SYAYTDAKTA NDILNADWGV SIPEGSRLIN
IPKHNGHLTL KHDTSLFGSD ASAGATLLYV GDRLGETIDP NYILPAYTLV NLFSTYALNQ
DLSLQFNITN LFDEVYYQSS YSSMWTMPGE PRSYKVSVRY NF
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