| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0473 |
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| Symbol | uvrD |
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| ID | 4250808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 537637 |
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| End bp | 539805 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117032 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_732610 |
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| Protein GI | 113968817 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT AGACGGCCTG AATGATAAAC AGCGCGAGGC TGTCGCGGCA
CCGCAATCCA GCATGTTAGT GCTTGCGGGC GCAGGCAGTG GCAAAACGCG AGTATTAACC
CACCGTATCG CGTGGTTAAT GCAGGTCGAA CAGCAGAGCC CTTACTCAAT TTTAGCCGTG
ACGTTTACCA ATAAAGCCGC AGCCGAGATG CGTGAGCGGG TGGAGAAGGT CGCTGGCACC
AATATGGGGC GGATGTGGAT TGGTACCTTC CACGGGTTAG CGCATCGTCT GTTACGCACT
CACTTCCAAG ATGCGGGACT ACCGCAAAGC TTCCAAATTC TCGATTCGGA CGATCAGGTG
CGTTTGCTGA AACGCATCCT TAAAAGTTTG AATCTGGATG AAAAACAATA TCCTCCCCGT
CAGGCGCAGG CCTATATCAA TGGCAAGAAA GACCAAGGAT TACGGCCCAA GCATATTGAT
GCGGGTGGTT TCCCGATTGA GCAAAACCTG CTGAAGATTT ATCAGGTTTA TCAAGAGTCT
TGCGACCGCG CAGGTTTAGT CGACTTTGCC GAAATCCTGC TGCGTGCCCA CGAGCTGTGG
CTCAATAAAC CGCATCTGCT GGCGCATTAT CAGGAGCGTT TTAAGCATAT TCTGGTGGAC
GAGTTCCAGG ATACCAACGC CATCCAATAT GCGTGGATCC GTGTGTTGGC CGGCCAAACT
GCCAACGTGA TGATAGTGGG TGACGATGAC CAATCCATTT ACGGTTGGCG CGGCGCTCAG
GTTGAAAACC TGCACCGGTT CCTGCGGGAT TTTCCGACTG CGACTACGAT TCGCCTCGAG
CAAAATTATC GCTCCAAGGG CAATATTTTG AAGGCGTCGA ACGCCCTTAT CGCCAATAAC
CCTGAGCGTT TAGGTAAAGA GCTGTGGACC GACGAAGCCG ATGGTGAGCC GATTTCCCTC
TACTGCGCCT TTAACGAAAT GGACGAGGCG CGCTTTATTG TCGGTCGTAT CAATGATTGG
TACGAAAAAG GCGGCAATTT AAGTGACTGC GCGATTTTAT ATCGCTCAAA CGCTCAGTCG
CGCGTGCTCG AAGAAGCCTT ATTACACAAA GGCTTAGCCT ATCGTATTTA CGGTGGCCTG
CGCTTCTTCG AACGCCAAGA GATTAAAGAT GCTATGGGTT ATATGCGTCT TATCAGCAAT
AAAAATGACG ATGCCGCCTT CGAGCGCGTG GTCAATACGC CGCCCCGTGG CATTGGCGAT
CGCACCTTAG ATATTCTGCG TTCGACCGCC CGTCAGCAAG AGCTTACGTT ATGGCAGGCT
TGTTTACGTT TGCTGGATGA AAAGGTGCTG GCTGGCCGCG CCGCCTCTGC GGTACGTGGC
TTTATGGATC TTATCGTCAC CCTGCAGGAA GAAACTCAGG ACATGGCGCT GTACCGGATG
ACAGACACAG TGATCCAAGC CTCTGGGCTT AAGGCCATGT ACGAGGCGGA AAAAGGCGAG
AAGGCCCACG CCCGTATCGA AAACTTAGAG GAACTCGTTA CTGCGGCGCG TACCTTCGAA
ATGCCAGAGG AGCTTGAGGA TATGGGCGAG CTGAATGCCT TCTTATCCCA TGCAGCCCTA
GAGGCGGGCG AAGGTCAGGC CGATGCCTTT ACCGATGCCG TACAGTTAAT GACACTGCAC
TCGGCCAAGG GGCTTGAGTT TACTATGGTG TTTATGGCGG GCGTCGAGGA GGGGATTTTC
CCGAGTAAGA TGGCGCTCGA AGAGGGCGAC AGACTCGATG AGGAACGCCG CCTCTGTTAC
GTGGGCATGA CCCGCGCGAT GGAAAAACTC TATATCACCT ATGCCGAATC CCGCCGTATT
TATGGTCGCG AGGATTATGC CCGCCCATCG CGCTTTATTA AGGAAATTCC GCCGCAATAT
GTGGACGAAA TTCGCTTAAA AGCGCAGGTG TCAACGCCGA TGGCGAATAA TCGCTTCAGT
ACGCAAAAGT CGGCGGTCGC CAACGATACT GGCTTTAGCG TCGGCCAAAG GGTGCATCAT
CCAAAATTTG GTGACGGCAA AGTGACTAAC TTCGAAGGCA GTGGCGCACA GGCGCGGGTG
CAGGTGAATT TTAGTGATTT TGGCAGTAAG TGGCTGGTGG TGGCCTACGC GCGTTTAGAG
GCGCGTTGA
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| Protein sequence | MDVSSLLDGL NDKQREAVAA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVAGT NMGRMWIGTF HGLAHRLLRT HFQDAGLPQS FQILDSDDQV
RLLKRILKSL NLDEKQYPPR QAQAYINGKK DQGLRPKHID AGGFPIEQNL LKIYQVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QERFKHILVD EFQDTNAIQY AWIRVLAGQT
ANVMIVGDDD QSIYGWRGAQ VENLHRFLRD FPTATTIRLE QNYRSKGNIL KASNALIANN
PERLGKELWT DEADGEPISL YCAFNEMDEA RFIVGRINDW YEKGGNLSDC AILYRSNAQS
RVLEEALLHK GLAYRIYGGL RFFERQEIKD AMGYMRLISN KNDDAAFERV VNTPPRGIGD
RTLDILRSTA RQQELTLWQA CLRLLDEKVL AGRAASAVRG FMDLIVTLQE ETQDMALYRM
TDTVIQASGL KAMYEAEKGE KAHARIENLE ELVTAARTFE MPEELEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFTMV FMAGVEEGIF PSKMALEEGD RLDEERRLCY
VGMTRAMEKL YITYAESRRI YGREDYARPS RFIKEIPPQY VDEIRLKAQV STPMANNRFS
TQKSAVANDT GFSVGQRVHH PKFGDGKVTN FEGSGAQARV QVNFSDFGSK WLVVAYARLE
AR
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