Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0456 |
Symbol | |
ID | 4251580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 519540 |
End bp | 519962 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638117015 |
Product | thioredoxin |
Protein accession | YP_732593 |
Protein GI | 113968800 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCG CCTGCCCCCA CTGTGACACC TTAAACCGCG TGCCCCAAGA GCGGTTAACT GAGCAGCCTA CCTGCGGCAA ATGTAAACAG GATCTGTTTG CGGCGGCGCC CATTGAGCTC ACGAGCGCCA ATTTTATCAA TCATGCTCAC AAGTCAGAGT TGCCAATCGT TGTCGATTTT TGGGCAAGCT GGTGCGGCCC ATGTAAAAGC TTTGCCCCCA CCTTTTCGGC GGCAGCAAAA GCATGGGAAC CACAATTTCG TTTCGGCAAG ATTAATACCG AGGAGCAACA GGCGTTGGCG GCGCAATTTG GGATCCGCTC TATCCCTACG CTGATGATAT TCAAACAGGG GCATCTTATC GCCCAGCAAG CGGGCGCCTT ACCCAAGTCG GCGCTCGACC AATGGCTGCA GAGTTATTGC TAG
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Protein sequence | MIIACPHCDT LNRVPQERLT EQPTCGKCKQ DLFAAAPIEL TSANFINHAH KSELPIVVDF WASWCGPCKS FAPTFSAAAK AWEPQFRFGK INTEEQQALA AQFGIRSIPT LMIFKQGHLI AQQAGALPKS ALDQWLQSYC
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