Gene Shewmr4_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0456 
Symbol 
ID4251580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp519540 
End bp519962 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content54% 
IMG OID638117015 
Productthioredoxin 
Protein accessionYP_732593 
Protein GI113968800 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCG CCTGCCCCCA CTGTGACACC TTAAACCGCG TGCCCCAAGA GCGGTTAACT 
GAGCAGCCTA CCTGCGGCAA ATGTAAACAG GATCTGTTTG CGGCGGCGCC CATTGAGCTC
ACGAGCGCCA ATTTTATCAA TCATGCTCAC AAGTCAGAGT TGCCAATCGT TGTCGATTTT
TGGGCAAGCT GGTGCGGCCC ATGTAAAAGC TTTGCCCCCA CCTTTTCGGC GGCAGCAAAA
GCATGGGAAC CACAATTTCG TTTCGGCAAG ATTAATACCG AGGAGCAACA GGCGTTGGCG
GCGCAATTTG GGATCCGCTC TATCCCTACG CTGATGATAT TCAAACAGGG GCATCTTATC
GCCCAGCAAG CGGGCGCCTT ACCCAAGTCG GCGCTCGACC AATGGCTGCA GAGTTATTGC
TAG
 
Protein sequence
MIIACPHCDT LNRVPQERLT EQPTCGKCKQ DLFAAAPIEL TSANFINHAH KSELPIVVDF 
WASWCGPCKS FAPTFSAAAK AWEPQFRFGK INTEEQQALA AQFGIRSIPT LMIFKQGHLI
AQQAGALPKS ALDQWLQSYC