| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0441 |
|---|
| Symbol | |
|---|
| ID | 4251565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 501534 |
|---|
| End bp | 502337 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638117000 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_732578 |
|---|
| Protein GI | 113968785 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGAC TGACGGGTAA AGTGGTCATT ATTACGGGCG CTTCGGAGGG AATCGGCCGT
GCGCTGGCCA TCGCCATGGC GCGGGTGGGT TGCCAACTGG TGCTCAGTGC CCGTAATGAA
ACACGTTTGG CATCCCTTGC CCTCGAAATC GCTAACTATG GTCCGACTCC CTTTGTATTT
GCCGCCGATG TCAGTAGCGC CTCCCAATGC GAAGCCTTAA TTCAAGCCAC GATTGTCCAT
TATGGTCGCC TCGATATTCT AGTGAATAAT GCGGGCATGA CCATGTGGTC ACGTTTCGAT
GAGTTAAATC AGTTGTCTGT GCTTGAAGAT ATCATGCGAG TCAACTACTT AGGGCCAGCG
TATTTAACTC ACGCCGCCTT ACCCTATTTA AAGTCGAGCC AAGGTCAGGT GGTGGTGGTT
GCCTCGGTAG CTGGGTTAAC GGGCGTGCCG ACACGCAGTG GCTATGCCGC TTCTAAACAT
GCTGTTATCG GCTTTTTTGA TTCGCTGCGG ATTGAACTGA CGGATGATAA TGTGGCCGTG
ACTGTGATTT GTCCCGATTT TGTCGTTTCA CAGATTCATA AACGTGCACT CGACGGTGAG
GGTAAGCCAC TCGGAACATC CCCAATGCAG GAAGCGAAAA TTATCACCGC CGAGCAGTGC
GCGAATATGA TGCTCCCAGT GATAGCGACC CGAGGTCGGC TGCTTATTAC GTCGCTACGC
GGCCGACTCG GGCGCTGGCT AAAGCTGATT GCGCCAGGCT TAATCGATAA AATTGCCCGT
AAGGCGATTG CCTCGGGTCG TTAA
|
|---|
| Protein sequence | MDGLTGKVVI ITGASEGIGR ALAIAMARVG CQLVLSARNE TRLASLALEI ANYGPTPFVF
AADVSSASQC EALIQATIVH YGRLDILVNN AGMTMWSRFD ELNQLSVLED IMRVNYLGPA
YLTHAALPYL KSSQGQVVVV ASVAGLTGVP TRSGYAASKH AVIGFFDSLR IELTDDNVAV
TVICPDFVVS QIHKRALDGE GKPLGTSPMQ EAKIITAEQC ANMMLPVIAT RGRLLITSLR
GRLGRWLKLI APGLIDKIAR KAIASGR
|
|---|
| |