Gene Shewmr4_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0412 
Symbol 
ID4251955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp458811 
End bp459737 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID638116971 
ProductPpx/GppA phosphatase 
Protein accessionYP_732549 
Protein GI113968756 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAC CCGCTTATGC CGCCATTACT TTAGGCTCTA ACAGTTTTAA TATGCTGATC 
GCTAAGACAA AAGGCGGTCG GCCACATATT ATTGCTAAAT ATAAGCGTAA GGTTAGGTTG
GCAGAAGGCA TTGGTGAAGA TGGCCATTTA ACTACGGAAG TGATGCAGCG TGGCTTAGAT
TGCCTAGCGA TGTTTGCTCA AATGTTAGCG CTGCATAAGA TCCATCCAAA TCATGTCGCT
GTGATTGCTA CGGCGACACT GCGTACCATC AATAACGCCG ATGAGTTTAA TCAGAAGGCG
ATCCCACTCC TAGGCCATCC TATTGAAATT ATTTCGGGGA TGCGTGAGGC CGAGCTGATT
TATCAAGGCA TGGTGGCGAC TACTTGTGGC CAAGGTCGAC GGTTAGTCAT TGATATTGGT
GGCGCCAGTA CCGAGTTTAT TATCGGTGAT GGTCATCAAG TTCAGTTTAA GACTAGTTTA
CCTATGGGCA GCGTGACTTT TAATCGTCGT TTCTTTAGCA ACGCTCCGTT GCAAGAGCTC
GATTTTGAAG ATGCCAAGCA GGAAGTGTTG GAAGTCTTAG GTGAACATAG ACAAAGGTTA
AAAGACTTAG GATGGCACTG TGTCGTTGGC GCTTCTGGTG CGGTGCAATC AGTGGTCGAA
GTCTTAATGC ACCGTAAGTT GTCTGAAACC ATTACCTTAG CCGTGCTGAC ACAGCTTAAA
GCGGAAATCC TTGCCGAAGA AGATGCGAGT CTTGCGGGGA TTATCGGCCT AAGCGCCGAA
CGCGCACCGA CATTTGCCGC TGGGGTGGCG ATTTTACTCG CGCTCTTTGA ACTATTGGGA
ATTGAGCAGT TGGCGCTATC GGGCGGCGCA TTGCGTGAGG GCGTGTTAGT CATGCTGGCA
CAGCGGATTT TAGAAGAAGC AATTTAA
 
Protein sequence
MPTPAYAAIT LGSNSFNMLI AKTKGGRPHI IAKYKRKVRL AEGIGEDGHL TTEVMQRGLD 
CLAMFAQMLA LHKIHPNHVA VIATATLRTI NNADEFNQKA IPLLGHPIEI ISGMREAELI
YQGMVATTCG QGRRLVIDIG GASTEFIIGD GHQVQFKTSL PMGSVTFNRR FFSNAPLQEL
DFEDAKQEVL EVLGEHRQRL KDLGWHCVVG ASGAVQSVVE VLMHRKLSET ITLAVLTQLK
AEILAEEDAS LAGIIGLSAE RAPTFAAGVA ILLALFELLG IEQLALSGGA LREGVLVMLA
QRILEEAI