Gene Shewmr4_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0399 
Symbolfis 
ID4251732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp445757 
End bp446062 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content46% 
IMG OID638116958 
ProductDNA-binding protein Fis 
Protein accessionYP_732536 
Protein GI113968743 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.48322e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC AGACAACTAA CACAGAAGTT CACCAGCTTA CCGTTGGCAA AATCGAAACC 
GCAAACGGCA CTATCAAGCC CCAGTTATTA CGTGACGCTG TTAAGCGTGC CGTAACTAAC
TTCTTCGCAC AGTTGGACGG TCAGGAAGCA CAAGAAGTGT ATGAAATGGT GCTAAGTGAA
GTTGAAGCAC CTCTGCTTGA CATCATCATG CAACACACTC GCGGCAACCA AACCCGCGCA
GCAAACATGC TAGGTATCAA CCGTGGTACT CTGCGTAAAA AATTAAAGAA ATACGGCATG
AACTAA
 
Protein sequence
MFDQTTNTEV HQLTVGKIET ANGTIKPQLL RDAVKRAVTN FFAQLDGQEA QEVYEMVLSE 
VEAPLLDIIM QHTRGNQTRA ANMLGINRGT LRKKLKKYGM N