| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0399 |
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| Symbol | fis |
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| ID | 4251732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 445757 |
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| End bp | 446062 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638116958 |
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| Product | DNA-binding protein Fis |
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| Protein accession | YP_732536 |
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| Protein GI | 113968743 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000548322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATC AGACAACTAA CACAGAAGTT CACCAGCTTA CCGTTGGCAA AATCGAAACC
GCAAACGGCA CTATCAAGCC CCAGTTATTA CGTGACGCTG TTAAGCGTGC CGTAACTAAC
TTCTTCGCAC AGTTGGACGG TCAGGAAGCA CAAGAAGTGT ATGAAATGGT GCTAAGTGAA
GTTGAAGCAC CTCTGCTTGA CATCATCATG CAACACACTC GCGGCAACCA AACCCGCGCA
GCAAACATGC TAGGTATCAA CCGTGGTACT CTGCGTAAAA AATTAAAGAA ATACGGCATG
AACTAA
|
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| Protein sequence | MFDQTTNTEV HQLTVGKIET ANGTIKPQLL RDAVKRAVTN FFAQLDGQEA QEVYEMVLSE
VEAPLLDIIM QHTRGNQTRA ANMLGINRGT LRKKLKKYGM N
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