| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0387 |
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| Symbol | |
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| ID | 4251948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 434024 |
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| End bp | 434722 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116946 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_732524 |
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| Protein GI | 113968731 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.8019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATG CCTTAACTGA AAAGGGTATC GACCACTGCG TTACTCCGCT CCTCTGTGTT
GAGGCAACGC CTCCGCTGCC ACCTGACACT TCACATCCCC TAGCCGATGT CGATATGGTT
ATCTGTATCA GCGCCAATGC GGTGAGCTTT GCTGATGCTG CGTTTAAAGT CGATACTGCC
CAAGTTAAAG ACTGGCCAAG CGTGCCTTAT TTCGCCGTGG GTCATGCGAC TTGGGAAGCG
CTGCAAGAAA AGGGAATTGA GGCTCTCGAA GCACCGGACG ATTGCCAGCA AACGGAAGGC
TTGCTTACCC TGCCAGCACT GCAACATATC CAAGGTAAAC ATATCACTAT CATTCGTGGC
GTCGGTGGTC GTGAAGCCCT CGCCGAGCAA CTGAATGCCA GAGGCGCGAA GGTGCGCTAT
TGGGAAGTCT ATCAACGCGC TTGCCCGCCG CTCGATGGTG CCGCTGTTAG TCAACAATGG
CGAGACTTTG GGATAGATAC TATCGTCATA ACGAGTGGTG AAGTACTGGA TAATCTGATT
AATCTAGTGC CAAAAGAGTT ATTTGCATGG CTGCGCTCAT GTCATATCAT AGTCCCCAGT
AACCGAGTAG AAGCTCAAGC TCATGCCTTT GGTATAACCC AAGTCACCAA TGCCAATGCC
GCCAACAGCA AAGCCGTGCT AAACGCCCTT AAACTCTAA
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| Protein sequence | MVDALTEKGI DHCVTPLLCV EATPPLPPDT SHPLADVDMV ICISANAVSF ADAAFKVDTA
QVKDWPSVPY FAVGHATWEA LQEKGIEALE APDDCQQTEG LLTLPALQHI QGKHITIIRG
VGGREALAEQ LNARGAKVRY WEVYQRACPP LDGAAVSQQW RDFGIDTIVI TSGEVLDNLI
NLVPKELFAW LRSCHIIVPS NRVEAQAHAF GITQVTNANA ANSKAVLNAL KL
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