Gene Shewmr4_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0372 
Symbol 
ID4251933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp398519 
End bp399685 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content50% 
IMG OID638116927 
Producthypothetical protein 
Protein accessionYP_732509 
Protein GI113968716 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCC CTTTTTCACC CCGCGAGTGG TTACAGCTGA ATATGCAGCA GCAAGGTTTA 
CTGCAACCTC ACTCGTCGGT GAGCGAACTG ATTAGCCGCC TTGGTTATGT GCAAATCGAC
TCCATCAATG TGGTCGAGCG GGCACATCAC CATGTGCTGC ATAGCCGGAT GCCGCAGTAT
CAACCGCAGA TGCTAGATAC TGCGCTGGCA CAGGGGGAGA TTTTTGAATA TTGGTCCCAT
GCGGCGGCCT ATTTGCCGAT TGCCGACTAC CGCTTTAGTT TGCAGCGTAA ACAGCTGCTA
CAAAATGGCG GCAAACATTG GTTTGAGCCA GACGATAAGG TGATGCAGGA AGTGCGCGCC
CGCATTCGCG CTGAAGGGCC ACTTAAAGCC AGTGACTTTG AACATACCGA AGGTAAAAAC
GGTGCCTGGT GGGACTGGAA ACCCGCCAAA AAAGCGCTAG AGCAGTTGTT TATGCGCGGC
GAGCTAATGG TGGTGCGGCG GGAAAAATTT CAAAAATGTT ATGATCTTAC CGAACGCGTG
CTGCCCGAAC ATATCAATAC CCAAGCGCCG AGTGAGGCCG AATTTGCCCG CCATTTGATT
GAGCGTTACC TCGATGCCCA TGCCTTTGGC TCGGCGGCGC AAATCGCGTA TCTGCGCAAA
GGCATAAAAG CTAATGTGAA TGAGCAATTA GTCGCAATGC AGTCCCAAGG TGAATTAGCG
AGCTTTAAGG CCGAAGGGCA ATGGTATTTT TATCGCCCCG AGCTGCAAAT AACCGCTGCA
ATGCCTAACC GAGTCTGGTT ACTCAATCCC TTCGATAATC TATTAATTCA GCGGCAACGA
TTAAAGCAAT GGTTTGATTT TGATTATCAA ATTGAAGTCT ATGTGCCCGC CGAAAAACGC
CAATATGGCT ATTACTCCCT CGCGATTTTG TGGCGCGACC GCTTCGTTGG TCGAGTAGAT
GTGAAAGCCG AGCGACAAAG CGGTCTACTG CTATTACAGC AGCTGACCCT AGAAGCTGGA
TTCGATGGCA TGGATGATGA CTTTTGTGCG GCATTTGAGG CGGCAGTCAC TGAGTATGCG
CGCTTTAATG GCTGTAGCCG CTGGAAACTG GTGAAGGCTA ACCATAAGGC ATTTAAACAA
AAATACGCAC GGCAGCAGAA GATCTAA
 
Protein sequence
MSSPFSPREW LQLNMQQQGL LQPHSSVSEL ISRLGYVQID SINVVERAHH HVLHSRMPQY 
QPQMLDTALA QGEIFEYWSH AAAYLPIADY RFSLQRKQLL QNGGKHWFEP DDKVMQEVRA
RIRAEGPLKA SDFEHTEGKN GAWWDWKPAK KALEQLFMRG ELMVVRREKF QKCYDLTERV
LPEHINTQAP SEAEFARHLI ERYLDAHAFG SAAQIAYLRK GIKANVNEQL VAMQSQGELA
SFKAEGQWYF YRPELQITAA MPNRVWLLNP FDNLLIQRQR LKQWFDFDYQ IEVYVPAEKR
QYGYYSLAIL WRDRFVGRVD VKAERQSGLL LLQQLTLEAG FDGMDDDFCA AFEAAVTEYA
RFNGCSRWKL VKANHKAFKQ KYARQQKI