Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0372 |
Symbol | |
ID | 4251933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 398519 |
End bp | 399685 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116927 |
Product | hypothetical protein |
Protein accession | YP_732509 |
Protein GI | 113968716 |
COG category | [S] Function unknown |
COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCC CTTTTTCACC CCGCGAGTGG TTACAGCTGA ATATGCAGCA GCAAGGTTTA CTGCAACCTC ACTCGTCGGT GAGCGAACTG ATTAGCCGCC TTGGTTATGT GCAAATCGAC TCCATCAATG TGGTCGAGCG GGCACATCAC CATGTGCTGC ATAGCCGGAT GCCGCAGTAT CAACCGCAGA TGCTAGATAC TGCGCTGGCA CAGGGGGAGA TTTTTGAATA TTGGTCCCAT GCGGCGGCCT ATTTGCCGAT TGCCGACTAC CGCTTTAGTT TGCAGCGTAA ACAGCTGCTA CAAAATGGCG GCAAACATTG GTTTGAGCCA GACGATAAGG TGATGCAGGA AGTGCGCGCC CGCATTCGCG CTGAAGGGCC ACTTAAAGCC AGTGACTTTG AACATACCGA AGGTAAAAAC GGTGCCTGGT GGGACTGGAA ACCCGCCAAA AAAGCGCTAG AGCAGTTGTT TATGCGCGGC GAGCTAATGG TGGTGCGGCG GGAAAAATTT CAAAAATGTT ATGATCTTAC CGAACGCGTG CTGCCCGAAC ATATCAATAC CCAAGCGCCG AGTGAGGCCG AATTTGCCCG CCATTTGATT GAGCGTTACC TCGATGCCCA TGCCTTTGGC TCGGCGGCGC AAATCGCGTA TCTGCGCAAA GGCATAAAAG CTAATGTGAA TGAGCAATTA GTCGCAATGC AGTCCCAAGG TGAATTAGCG AGCTTTAAGG CCGAAGGGCA ATGGTATTTT TATCGCCCCG AGCTGCAAAT AACCGCTGCA ATGCCTAACC GAGTCTGGTT ACTCAATCCC TTCGATAATC TATTAATTCA GCGGCAACGA TTAAAGCAAT GGTTTGATTT TGATTATCAA ATTGAAGTCT ATGTGCCCGC CGAAAAACGC CAATATGGCT ATTACTCCCT CGCGATTTTG TGGCGCGACC GCTTCGTTGG TCGAGTAGAT GTGAAAGCCG AGCGACAAAG CGGTCTACTG CTATTACAGC AGCTGACCCT AGAAGCTGGA TTCGATGGCA TGGATGATGA CTTTTGTGCG GCATTTGAGG CGGCAGTCAC TGAGTATGCG CGCTTTAATG GCTGTAGCCG CTGGAAACTG GTGAAGGCTA ACCATAAGGC ATTTAAACAA AAATACGCAC GGCAGCAGAA GATCTAA
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Protein sequence | MSSPFSPREW LQLNMQQQGL LQPHSSVSEL ISRLGYVQID SINVVERAHH HVLHSRMPQY QPQMLDTALA QGEIFEYWSH AAAYLPIADY RFSLQRKQLL QNGGKHWFEP DDKVMQEVRA RIRAEGPLKA SDFEHTEGKN GAWWDWKPAK KALEQLFMRG ELMVVRREKF QKCYDLTERV LPEHINTQAP SEAEFARHLI ERYLDAHAFG SAAQIAYLRK GIKANVNEQL VAMQSQGELA SFKAEGQWYF YRPELQITAA MPNRVWLLNP FDNLLIQRQR LKQWFDFDYQ IEVYVPAEKR QYGYYSLAIL WRDRFVGRVD VKAERQSGLL LLQQLTLEAG FDGMDDDFCA AFEAAVTEYA RFNGCSRWKL VKANHKAFKQ KYARQQKI
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