| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0364 |
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| Symbol | |
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| ID | 4251558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 389117 |
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| End bp | 390976 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638116919 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_732501 |
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| Protein GI | 113968708 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGT TACGTTCAGC AACCAGTACC GAAGGCCGCA ATATGGCGGG TGCCCGTGCG
CTATGGCGCG CCACAGGGGT GAAAGACAAT GATTTTGGTA AGCCGATTAT TGCGATTGCC
AACTCCTTTA CTCAGTTTGT CCCTGGCCAT GTGCACTTAA AAGATATGGG CTCTCTGGTG
GCGGGCGCCA TCGAAGAAGC AGGCGGTATT GCCAAAGAAT TCAACACCAT CGCTGTGGAT
GATGGTATCG CCATGGGCCA CGGTGGCATG CTCTACAGTC TGCCTTCGCG GGAGCTTATC
GCCGATAGCG TCGAGTATAT GGTCAATGCC CACTGCGCTG ATGCGCTGGT TTGTATCTCT
AACTGCGACA AAATCACCCC CGGCATGTTG ATGGCGGCGC TGCGCCTCAA TATCCCCGTG
GTGTTTGTGT CGGGCGGGCC GATGGAGGCG GGTAAAACCA AACTGTCGGA CAAGCTTATC
AAACTCGATT TAGTCGATGC CATGGTGGCG GCGGCAGACT CGAGTGTGAG CGATGAAGAT
AGCGCTAAAA TCGAACGTAG TGCTTGCCCT ACATGTGGTT CCTGTTCGGG CATGTTTACC
GCTAACTCGA TGAACTGTTT AACCGAAGCT TTAGGTCTGT CGCTGCCGGG CAACGGCTCC
ATGCTCGCGA CCCATGCCGA TCGCCGCGAA CTGTTTTTAG AAGCGGGCCG CCGCGTAATG
GCGCTAACCA AACGTTACTA CGAAAAAGAT GATGCCTCGG CACTGCCGCG CAACATCGCC
AGCTTTAAAG CCTTTGAGAA CGCCATGGCG CTGGATATCG CCATGGGCGG TTCGTCTAAT
ACTGTGTTGC ACTTATTGGC TGCGGCGCAG GAGGCAGACG TGGCATTTAC TATGGACGAT
ATCGACCGTA TGTCGCGCCA AGTGCCGCAT CTGTGTAAGG TGGCGCCGTC GACCGCTAAA
TACCATATGG AAGATGTGCA CCGCGCCGGT GGTGTGATGG GCATCTTAGG CGAACTCGAC
CGCGCCGGAC TGCTGCATAC CGATGTGCCA CACGTCGCCG CCGATGCGGG CGGCAATCTC
AAGTCGGTGC TCGCAAAGTA CGATGTCATG CAAACCCAAG ATGACAACGT AAAACAATTT
TTTATGGCTG GACCTGCGGG CATTCCTACC ACTAAAGCCT TTAGCCAAGA CTGCCGCTGG
CCATCGCTGG ACGATGACAG GCGTGAAGGT TGTATCCGTA GCCGCGAATT TGCCTTCAGC
CAAGAGGGCG GTTTGGCCGT GTTATCGGGC AATCTGGCCG ACAATGGCTG TATCGTTAAA
ACTGCCGGTG TGGATGAGTC TAACCTGACC TTTACTGGCA GCGCTCGGGT GTACGAAAGC
CAAGATGACG CAGTCGCTGG CATCTTAGGT GGCGAAGTGG TGGCGGGTGA TGTGGTGGTG
ATTCGTTACG AAGGGCCAAA AGGCGGCCCA GGTATGCAAG AAATGTTGTA CCCCACCAGT
TACTTAAAAT CCCGTGGCTT AGGCAAGGCC TGCGCGCTGA TCACCGACGG CCGTTTCTCT
GGTGGAACTT CCGGTTTATC CATCGGCCAT GTATCGCCTG AAGCGGCGGC GGGCGGCACT
ATTGCCTTGA TTGAAAACGG CGATCGGATC GAAATCGATA TTCCTAAGCG CAGTATCAAG
CTTGCGGTGA GTGATGCTGA ATTGGCTGCG CGCCGTGAAA CCATGCTCGC CCGTGGGCCA
ATGGCGTGGA AACCGCTTTC GCGTCAGCGT TATGTGTCGA TGGCGCTCAA AGCCTACGCC
ATGCTTGCCA CCAGTGCCGA TAAGGGCGCG GTGCGCGATC GCAGTAAGTT GGAGGACTGA
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| Protein sequence | MPKLRSATST EGRNMAGARA LWRATGVKDN DFGKPIIAIA NSFTQFVPGH VHLKDMGSLV
AGAIEEAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADALVCIS
NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLSDKLI KLDLVDAMVA AADSSVSDED
SAKIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS MLATHADRRE LFLEAGRRVM
ALTKRYYEKD DASALPRNIA SFKAFENAMA LDIAMGGSSN TVLHLLAAAQ EADVAFTMDD
IDRMSRQVPH LCKVAPSTAK YHMEDVHRAG GVMGILGELD RAGLLHTDVP HVAADAGGNL
KSVLAKYDVM QTQDDNVKQF FMAGPAGIPT TKAFSQDCRW PSLDDDRREG CIRSREFAFS
QEGGLAVLSG NLADNGCIVK TAGVDESNLT FTGSARVYES QDDAVAGILG GEVVAGDVVV
IRYEGPKGGP GMQEMLYPTS YLKSRGLGKA CALITDGRFS GGTSGLSIGH VSPEAAAGGT
IALIENGDRI EIDIPKRSIK LAVSDAELAA RRETMLARGP MAWKPLSRQR YVSMALKAYA
MLATSADKGA VRDRSKLED
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