Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0343 |
Symbol | |
ID | 4250854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 366157 |
End bp | 366591 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638116898 |
Product | thioesterase superfamily protein |
Protein accession | YP_732480 |
Protein GI | 113968687 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCT TGCTCAGCAT AGAAATGGAC ATGCAGATCC CCTTCCACGA TGTGGATTCG ATGGGGATAA CTTGGCATGG TAATTACCTG CGTTATTTCG AGATTGCCCG CTGCAAATTA CTCGACGAGT TAGGCTACAA CTATCGCCAA ATGCAGGCCT CGAACTACGC TTGGCCGATT ATTGATTTGC AGATCAAATA CGTTAAGGCC AGCACCTTCG AGCAAAACAT TACCGTGCGC GCCGAGTTGG TCGAGTGGGA AAATCGCCTA AAAATCAATT ATCAAATCCG TGATACGGCA ACTGGTGAGC GTATTACCAA AGGCTATACC ATTCAGGCGG CGGTGGATAT GACGAGCCAA GAAATGTGCT TTGTGACGCC AGAGATATTT CGCAGCAAAA TCGCCCCGCT GCTAGCAAAG GCGGATAGCG AATGA
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Protein sequence | MKALLSIEMD MQIPFHDVDS MGITWHGNYL RYFEIARCKL LDELGYNYRQ MQASNYAWPI IDLQIKYVKA STFEQNITVR AELVEWENRL KINYQIRDTA TGERITKGYT IQAAVDMTSQ EMCFVTPEIF RSKIAPLLAK ADSE
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