Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0308 |
Symbol | |
ID | 4251922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 333593 |
End bp | 334354 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638116863 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_732445 |
Protein GI | 113968652 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAT TGAATAAAAC TGCCGTGGTG ACTGGGGCTG CCGGGGGCAT AGGGCAGGCC ATCATTCGTA AACTGCTCGA CGAAGGGGCT AGCGTCGTTG CCGCCGATCT GTCTGCCGAT GCGCTGAAAG TATTTGATGA TTTTCCTGCC GACAAGCTGT CAATCTTTAG CGTAGATGTC ACCGATTACA GCCAAGTTGA GGCTATGGTC AAGCATGCGG CCAAGCAGTT TGGCCAGCTC GATATTCTGA TCAATAACGC GGGTATTGGT TTGGCTAAAC CGCTGTTACA GCATGATCCT ATTAATGATT TTGAACCTGT CACCAATGTT AACCAAAGAG GTGTATATCA CGGCATCCTC GCTGGTGGGC GCCAATTCCA AGCCCAAGGC ACTCGGGGTG TGATCCTCAA TACCTCTTCT GTTTATGCGC AAATCGCCTC AGAAATGACC TTCACCTACA ACGTCAGTAA AGCGGCCGTC GATATGATGA CCAAATGCGC CGCGCTTGAG TTTGCACCGC TTGGCGTGCG GGTCTGTGCC GTGGCGCCGG GCCGTGTCGA TACACCTATG TTGCGTCAGT ATGAGGCGCT GGGACTGTGG GAACACATTC GCAAAGAACA AATGCGCCAA GAATTTACCC AACCGAATGA GATTGCCGAT GTGGTGGCGT TTCTCGTCAG TGATGAGGCC AATTGCATCA ATGGTTGCAC AGTGAACGCC TCCGACGGTT TTGAAAACTT TAAATATCCA CTGCTGGGGT AG
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Protein sequence | MRLLNKTAVV TGAAGGIGQA IIRKLLDEGA SVVAADLSAD ALKVFDDFPA DKLSIFSVDV TDYSQVEAMV KHAAKQFGQL DILINNAGIG LAKPLLQHDP INDFEPVTNV NQRGVYHGIL AGGRQFQAQG TRGVILNTSS VYAQIASEMT FTYNVSKAAV DMMTKCAALE FAPLGVRVCA VAPGRVDTPM LRQYEALGLW EHIRKEQMRQ EFTQPNEIAD VVAFLVSDEA NCINGCTVNA SDGFENFKYP LLG
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